CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSHAG00000011938
(
Sarcophilus harrisii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSHAG00000011938
T110042_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF3
M07613_2.00
Homo sapiens
TCWNTYAKTCADTCA
TGAHTGAMTRANWGA
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF3.RCADE.ReprocessedData
0.819
0.973
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSHAP00000013960
C2H2 ZF
239
261
HKCDECGKSFNRTSDLIQHQRIH
ENSSHAP00000013960
C2H2 ZF
267
289
YECNECGKAFSQSSHLIQHQRIH
ENSSHAP00000013960
C2H2 ZF
295
317
YECNDCGKTFSCSSALILHRRIH
ENSSHAP00000013960
C2H2 ZF
323
345
YECNECGKTFSWSSTLTHHQRIH
ENSSHAP00000013960
C2H2 ZF
351
373
YECNECGKAFSRSSTLIHHQRIH
ENSSHAP00000013960
C2H2 ZF
379
401
YECNECGKAFSQSSHLYQHQRIH
ENSSHAP00000013960
C2H2 ZF
407
429
YECRECGGRFTYSSGLIQHQRIH
ENSSHAP00000013960
C2H2 ZF
435
457
YECSECGKAFRYSSALVRHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Sarcophilus harrisii
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy