ENSSHAG00000012439 (Sarcophilus harrisii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSHAG00000012439 T110047_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Zkscan1
M00771_2.00
Mus musculus
NNNHDHDNNN

NNNHDHDNNN
PBM
Weirauch et al.(2013)
pTH2280
0.809 0.964
Zkscan1
M08985_2.00
Mus musculus
DVHDBNCCTACTRTGTGCH

DGCACAYAGTAGGNVHDBH
Misc
Kulakovskiy et al.(2013)
ZKSC1_MOUSE.H11MO.0.A
0.809 0.964
ZKSCAN1
M05847_2.00
Homo sapiens
NNNCCTACTAHGH

DCDTAGTAGGNNN
SMiLE-seq
Isakova et al.(2017)
ZKSCAN1
0.808 0.957
ZKSCAN1
M08874_2.00
Homo sapiens
DVHDBNCCTACTRTGTGCH

DGCACAYAGTAGGNVHDBH
Misc
Kulakovskiy et al.(2013)
ZKSC1_HUMAN.H11MO.0.B
0.808 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSHAP00000014571 C2H2 ZF 373 395
ENSSHAP00000014571 C2H2 ZF 401 423
ENSSHAP00000014571 C2H2 ZF 429 451
ENSSHAP00000014571 C2H2 ZF 457 479
ENSSHAP00000014571 C2H2 ZF 485 507
ENSSHAP00000014571 C2H2 ZF 513 535

Links

Other C2H2 ZF family TFs
Other Sarcophilus harrisii TFs

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40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action