CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZSCAN9
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000001203
T110167_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZSCAN9
M04465_2.00
Homo sapiens
NKGVTTCTTATCTTATCMYH
DRKGATAAGATAAGAABCMN
SELEX
Yin et al.(2017)
ZSCAN9_eDBD_HT-SELEX
0.798
0.904
ZSCAN9
M04466_2.00
Homo sapiens
NKGVTTCTTATCTTATCCYY
RRGGATAAGATAAGAABCMN
SELEX
Yin et al.(2017)
ZSCAN9_eDBD_Methyl-HT-SELEX
0.798
0.904
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000001272
C2H2 ZF
253
275
HRCEECGKSFAQSSGLIRHQRVH
ENSSSCP00000001272
C2H2 ZF
281
303
YECNECGKTFSRSSGLFNHRGIH
ENSSSCP00000001272
C2H2 ZF
309
331
YHCKECGKAFSQSAGLIQHQRIH
ENSSSCP00000001272
C2H2 ZF
337
359
YQCSQCNKSYGRRSFLIEHQRSH
ENSSSCP00000001272
C2H2 ZF
365
387
HHCNKCGKSFNRHCNLIRHQKIH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy