ZSCAN9 (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000001203 T110167_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZSCAN9
M04465_2.00 		Homo sapiens
NKGVTTCTTATCTTATCMYH
DRKGATAAGATAAGAABCMN		 SELEX
Yin et al.(2017)
ZSCAN9_eDBD_HT-SELEX 		0.798 0.904
ZSCAN9
M04466_2.00 		Homo sapiens
NKGVTTCTTATCTTATCCYY
RRGGATAAGATAAGAABCMN		 SELEX
Yin et al.(2017)
ZSCAN9_eDBD_Methyl-HT-SELEX 		0.798 0.904
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000001272 C2H2 ZF 253 275
ENSSSCP00000001272 C2H2 ZF 281 303
ENSSSCP00000001272 C2H2 ZF 309 331
ENSSSCP00000001272 C2H2 ZF 337 359
ENSSSCP00000001272 C2H2 ZF 365 387

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

Invalid Input OrderBy

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action