CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF260
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000002930
T110189_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF260
M08395_2.00
Homo sapiens
BYHBYNTHBYHYTCC
GGARDRVDANRVDRV
ChIP-seq
Schmitges et al.(2016)
Q3ZCT1_9-13.RCADE
0.776
0.946
ZNF260
M08959_2.00
Homo sapiens
TTTWYAYDGYTGCATASTATTCCA
TGGAATASTATGCARCHRTRWAAA
Misc
Kulakovskiy et al.(2013)
ZN260_HUMAN.H11MO.0.C
0.776
0.946
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000003156
C2H2 ZF
24
46
YECNECGKTFSLKQNITEHKKMH
ENSSSCP00000003156
C2H2 ZF
52
74
HECTECGKVFSRVSSLTLHLRSH
ENSSSCP00000003156
C2H2 ZF
80
102
YKCNKCGKPFTQKGNLLSHQKHH
ENSSSCP00000003156
C2H2 ZF
133
155
YACKECGKAFSGKSYLTEHEKIH
ENSSSCP00000003156
C2H2 ZF
161
183
FECNQCGRAFSQKQYLVKHQNIH
ENSSSCP00000003156
C2H2 ZF
189
211
FKCNECGKAFSQKENLIIHQRIH
ENSSSCP00000003156
C2H2 ZF
217
239
YECKGCGKAFIQKSSLIRHQRSH
ENSSSCP00000003156
C2H2 ZF
245
267
YICKECGKAFSGKSNLTEHEKIH
ENSSSCP00000003156
C2H2 ZF
273
295
YKCNECGTIFRQKQYLIKHHNIH
ENSSSCP00000003156
C2H2 ZF
301
323
YECNKCGKAFSRITSLIVHVRIH
ENSSSCP00000003156
C2H2 ZF
329
351
YECKICGKAFCQSSSLTVHMRSH
ENSSSCP00000003156
C2H2 ZF
357
379
YGCNECGKAFSQFSTLALHMRIH
ENSSSCP00000003156
C2H2 ZF
385
407
YQCNQCGKAFSQKSHHIRHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy