RBAK (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000008668 T110315_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBAK
M07595_2.00 		Homo sapiens
BSYYBYTYSTYHCBN
NVGDRASRARVRRSV		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
RBAK.RCADE.ReprocessedData 		0.773 0.979
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000009241 C2H2 ZF 256 278
ENSSSCP00000009241 C2H2 ZF 284 306
ENSSSCP00000009241 C2H2 ZF 312 334
ENSSSCP00000009241 C2H2 ZF 340 362
ENSSSCP00000009241 C2H2 ZF 368 390
ENSSSCP00000009241 C2H2 ZF 396 418
ENSSSCP00000009241 C2H2 ZF 424 446
ENSSSCP00000009241 C2H2 ZF 452 474
ENSSSCP00000009241 C2H2 ZF 504 516
ENSSSCP00000009241 C2H2 ZF 532 554
ENSSSCP00000009241 C2H2 ZF 560 582
ENSSSCP00000009241 C2H2 ZF 588 610
ENSSSCP00000009241 C2H2 ZF 616 638
ENSSSCP00000009241 C2H2 ZF 644 666
ENSSSCP00000009241 C2H2 ZF 672 694

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RBAK Erinaceus europaeus ENSEEUG00000007766 I 0.797
RBAK Sorex araneus ENSSARG00000008259 N 0.793
RBAK Equus caballus ENSECAG00000009724 I 0.782
ENSOARG00000002641 Ovis aries ENSOARG00000002641 I 0.781
RBAK Bos taurus ENSBTAG00000010291 I 0.780
RBAK Canis familiaris ENSCAFG00000029211 I 0.777
ENSMPUG00000016607 Mustela putorius furo ENSMPUG00000016607 I 0.777
ENSPPYG00000017329 Pongo abelii ENSPPYG00000017329 I 0.773
RBAK Pan troglodytes ENSPTRG00000018880 I 0.773
RBAK Homo sapiens ENSG00000146587 D 0.773
ENSPANG00000015671 Papio anubis ENSPANG00000015671 I 0.773
ENSNLEG00000015490 Nomascus leucogenys ENSNLEG00000015490 I 0.773
ENSP00000275423 Macaca fascicularis ENSP00000275423 I 0.773
ENSMMUG00000006521 Macaca mulatta ENSMMUG00000006521 I 0.773
ENSCSAG00000017653 Chlorocebus sabaeus ENSCSAG00000017653 I 0.773
RBAK Gorilla gorilla ENSGGOG00000008465 I 0.773
RBAK Callithrix jacchus ENSCJAG00000021500 I 0.772
RBAK Myotis lucifugus ENSMLUG00000004409 I 0.765