CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RBAK
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000008668
T110315_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RBAK
M07595_2.00
Homo sapiens
BSYYBYTYSTYHCBN
NVGDRASRARVRRSV
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
RBAK.RCADE.ReprocessedData
0.773
0.979
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000009241
C2H2 ZF
256
278
FECSECGKSFCKKSKFIIHQRAH
ENSSSCP00000009241
C2H2 ZF
284
306
YECNVCGKSFSQKGTLTVHRRSH
ENSSSCP00000009241
C2H2 ZF
312
334
YKCNECGKTFCQKLHLTQHLRTH
ENSSSCP00000009241
C2H2 ZF
340
362
YECNECGKTFCQKTHLTLHQRNH
ENSSSCP00000009241
C2H2 ZF
368
390
YPCNECGKSFSRKSALSDHQRTH
ENSSSCP00000009241
C2H2 ZF
396
418
YKCNECGKSYYRKSTLITHQRTH
ENSSSCP00000009241
C2H2 ZF
424
446
YQCSECGKFFSRVSYLTIHYRSH
ENSSSCP00000009241
C2H2 ZF
452
474
YECNECGKTFNLNSAFIRHRKVH
ENSSSCP00000009241
C2H2 ZF
504
516
YECSECGKTFLEN
ENSSSCP00000009241
C2H2 ZF
532
554
YECNICGKLFSELSYYTIHYRSH
ENSSSCP00000009241
C2H2 ZF
560
582
YGCNECGKTFSHNSSLFRHQRVH
ENSSSCP00000009241
C2H2 ZF
588
610
YECYECGKFFSQKSYLTIHHRIH
ENSSSCP00000009241
C2H2 ZF
616
638
YECSKCGKVFSRMSNLTVHYRSH
ENSSSCP00000009241
C2H2 ZF
644
666
YECNECGKVFSQKSYLTVHYRTH
ENSSSCP00000009241
C2H2 ZF
672
694
YECNECGKKFHHRSAFNSHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy