PRDM16 (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000021490 T110444_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PRDM16
M10223_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_03
0.816 0.974
PRDM16
M10224_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_04
0.816 0.974
PRDM16
M10225_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_05
0.816 0.974
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000020637 C2H2 ZF 84 105
ENSSSCP00000020637 C2H2 ZF 137 159
ENSSSCP00000020637 C2H2 ZF 165 187
ENSSSCP00000020637 C2H2 ZF 193 216
ENSSSCP00000020637 C2H2 ZF 222 244
ENSSSCP00000020637 C2H2 ZF 250 272
ENSSSCP00000020637 C2H2 ZF 279 300
ENSSSCP00000020637 C2H2 ZF 789 811
ENSSSCP00000020637 C2H2 ZF 817 840
ENSSSCP00000020637 C2H2 ZF 846 868

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PRDM16 Bos taurus ENSBTAG00000018965 I 0.819
ENSP00000417899-D2 Bos grunniens ENSP00000417899-D2 I 0.819
PRDM16 Equus caballus ENSECAG00000017045 I 0.818
PRDM16 Otolemur garnettii ENSOGAG00000005055 I 0.818
PRDM16 Loxodonta africana ENSLAFG00000001071 I 0.816
ENSLOCG00000005336 Lepisosteus oculatus ENSLOCG00000005336 I 0.816
ENSPPYG00000001968 Pongo abelii ENSPPYG00000001968 I 0.816
ENSP00000270722 Macaca fascicularis ENSP00000270722 I 0.816
PRDM16 Gorilla gorilla ENSGGOG00000003763 I 0.816
PRDM16 Macaca mulatta ENSMMUG00000009350 I 0.816
PRDM16 Homo sapiens ENSG00000142611 D 0.816
ENSGALG00000001063 Gallus gallus ENSGALG00000001063 I 0.815
Gfo_R009744 Geospiza fortis Gfo_R009744 I 0.815
ENSAPLG00000005898 Anas platyrhynchos ENSAPLG00000005898 I 0.815
Brh_R007819 Buceros rhinoceros Brh_R007819 I 0.815
Alligator_sinensis_CCG011602.1 Alligator sinensis Alligator_sinensis_CCG011602.1 I 0.815
Afo_R003306 Aptenodytes forsteri Afo_R003306 I 0.815
XP_002938538 Xenopus tropicalis XP_002938538 I 0.815
PRDM16 Meleagris gallopavo ENSMGAG00000001857 I 0.815
ENSPSIG00000004093 Pelodiscus sinensis ENSPSIG00000004093 I 0.815
PRDM16 Canis familiaris ENSCAFG00000019473 I 0.814
Aan_R005955 Calypte anna Aan_R005955 I 0.793
ENSFALG00000009580 Ficedula albicollis ENSFALG00000009580 I 0.793
Ogr15306 Ophisaurus gracilis Ogr15306 I 0.792
PRDM16 Danio rerio ENSDARG00000078324 I 0.786
ENSGMOG00000015664 Gadus morhua ENSGMOG00000015664 I 0.784
ENSAMXG00000014024 Astyanax mexicanus ENSAMXG00000014024 I 0.781
si:ch211-263k4.2 Oryzias latipes ENSORLG00000004492 I 0.780
ENSPFOG00000010341 Poecilia formosa ENSPFOG00000010341 I 0.780
ENSXMAG00000019072 Xiphophorus maculatus ENSXMAG00000019072 I 0.780
si:ch211-263k4.2 Gasterosteus aculeatus ENSGACG00000006600 I 0.780
ENSONIG00000002121 Oreochromis niloticus ENSONIG00000002121 I 0.775
si:ch211-263k4.2 Tetraodon nigroviridis ENSTNIG00000011975 N 0.761
si:ch211-263k4.2 Takifugu rubripes ENSTRUG00000014772 N 0.761