CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSSCG00000022023
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000022023
T110463_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZKSCAN5
M07709_2.00
Homo sapiens
TCACCTCCN
NGGAGGTGA
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN5.RCADE.OriginalMapping
0.817
0.960
Zkscan5
M00785_2.00
Mus musculus
NWYDHBDNHN
NDNHVDHRWN
PBM
Weirauch et al.(2013)
pTH2283
0.803
0.938
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000021147
C2H2 ZF
346
368
HRCNDCGKFFLQASNFIQHRRIH
ENSSSCP00000021147
C2H2 ZF
374
396
FKCGECGKSYNQRVHLTQHQRVH
ENSSSCP00000021147
C2H2 ZF
402
424
YKCQVCGKAFRVSSHLVQHHSVH
ENSSSCP00000021147
C2H2 ZF
430
452
YGCPECGKSFGRHSHLIEHLKRH
ENSSSCP00000021147
C2H2 ZF
545
567
HKCNECGKSFIQSAHLIQHQRIH
ENSSSCP00000021147
C2H2 ZF
573
595
FRCDECGKSYNQRVHLTQHQRVH
ENSSSCP00000021147
C2H2 ZF
601
623
YTCPLCGKAFRVRSHLVQHQSVH
ENSSSCP00000021147
C2H2 ZF
629
651
FKCSECGKGFGRRSHLAGHLRLH
ENSSSCP00000021147
C2H2 ZF
657
679
HQCHECGEIFFQYVSLIEHQVLH
ENSSSCP00000021147
C2H2 ZF
713
735
YKCDVCGKAFRYSSDLIQHYRTH
ENSSSCP00000021147
C2H2 ZF
769
791
HQCTECGRGFTLKSHLNQHQRIH
ENSSSCP00000021147
C2H2 ZF
797
819
FQCKECGMSFSWSCSLFKHLRSH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy