ZSCAN16 (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000022664 T110481_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZSCAN16
M02924_2.00 		Homo sapiens
MRTGTTAACAGAACACCY
RGGTGTTCTGTTAACAYK		 SELEX
Jolma et al.(2013)
ZNF435_1 		0.824 0.989
ZSCAN16
M04623_2.00 		Homo sapiens
HGAGGCTCTGTTAACAHTB
VADTGTTAACAGAGCCTCD		 SELEX
Yin et al.(2017)
ZSCAN16_eDBD_HT-SELEX 		0.824 0.989
ZSCAN16
M04625_2.00 		Homo sapiens
NGAGGCTCTGTTAACANYN
NRNTGTTAACAGAGCCTCN		 SELEX
Yin et al.(2017)
ZSCAN16_FL_HT-SELEX 		0.824 0.989
ZSCAN16
M08377_2.00 		Homo sapiens
RTRTRTRTATRTRTRTRTATATRT
AYATATAYAYAYAYATAYAYAYAY		 ChIP-seq
Schmitges et al.(2016)
Q9H4T2.MEME 		0.824 0.989
ZSCAN16
M04624_2.00 		Homo sapiens
HGAGGCTCTGTTAACAHTB
VADTGTTAACAGAGCCTCD		 SELEX
Yin et al.(2017)
ZSCAN16_eDBD_Methyl-HT-SELEX 		0.824 0.989
ZSCAN16
M04626_2.00 		Homo sapiens
NGAGGCTCTGTTAACAHTN
NADTGTTAACAGAGCCTCN		 SELEX
Yin et al.(2017)
ZSCAN16_FL_Methyl-HT-SELEX 		0.824 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000022424 C2H2 ZF 234 256
ENSSSCP00000022424 C2H2 ZF 262 284
ENSSSCP00000022424 C2H2 ZF 290 312
ENSSSCP00000022424 C2H2 ZF 318 340

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZSCAN16 Bos taurus ENSBTAG00000031873 I 0.827
ZSCAN16 Vicugna pacos ENSVPAG00000003998 I 0.827
ENSP00000366527-D1 Bos grunniens ENSP00000366527-D1 I 0.827
ENSSSCG00000001198 Sus scrofa ENSSSCG00000001198 I 0.827
ZSCAN16 Equus caballus ENSECAG00000009944 I 0.825
ENSNLEG00000004468 Nomascus leucogenys ENSNLEG00000004468 I 0.824
ENSPPYG00000016364 Pongo abelii ENSPPYG00000016364 I 0.824
ZSCAN16 Pan troglodytes ENSPTRG00000022859 I 0.824
ZSCAN16 Macaca mulatta ENSMMUG00000003331 I 0.824
ENSPANG00000012450 Papio anubis ENSPANG00000012450 I 0.824
ZSCAN16 Homo sapiens ENSG00000196812 D 0.824
ZSCAN16 Gorilla gorilla ENSGGOG00000023909 I 0.824
ENSP00000366527 Macaca fascicularis ENSP00000366527 I 0.824
ENSCSAG00000007967 Chlorocebus sabaeus ENSCSAG00000007967 I 0.824
ENSTSYG00000000670 Tarsius syrichta ENSTSYG00000000670 I 0.821
ENSSHAG00000002495 Sarcophilus harrisii ENSSHAG00000002495 I 0.814
ZSCAN16 Monodelphis domestica ENSMODG00000007492 I 0.814
ZSCAN16 Callithrix jacchus ENSCJAG00000018686 I 0.814
ZSCAN16 Choloepus hoffmanni ENSCHOG00000008635 I 0.814
ENSMEUG00000000131 Macropus eugenii ENSMEUG00000000131 I 0.814
ZSCAN16 Tursiops truncatus ENSTTRG00000013470 I 0.812
ZSCAN16 Dasypus novemcinctus ENSDNOG00000013588 I 0.812
ZSCAN16 Canis familiaris ENSCAFG00000032617 I 0.810
ENSTBEG00000005011 Tupaia belangeri ENSTBEG00000005011 I 0.794