CTCF (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000024253 T110511_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CTCF
M08238_2.00 		Homo sapiens
GCGCCCYCTGSYGGY
RCCRSCAGRGGGCGC		 ChIP-seq
Najafabadi et al.(2015b)
CTCF 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000019814 C2H2 ZF 23 45
ENSSSCP00000019814 C2H2 ZF 51 73
ENSSSCP00000019814 C2H2 ZF 79 102
ENSSSCP00000019814 C2H2 ZF 109 132
ENSSSCP00000019814 C2H2 ZF 139 161
ENSSSCP00000019814 C2H2 ZF 167 189
ENSSSCP00000019814 C2H2 ZF 195 218
ENSSSCP00000019814 C2H2 ZF 227 247

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CTCF Homo sapiens ENSG00000102974 D 0.827
CTCF Macaca mulatta ENSMMUG00000009798 I 0.820