CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSSCG00000024278
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000024278
T110512_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF184
M08285_2.00
Homo sapiens
TCYTCWCCA
TGGWGARGA
ChIP-seq
Schmitges et al.(2016)
Q99676_4-6.RCADE
0.823
0.991
ZNF184
M07571_2.00
Homo sapiens
NNNNNBNNNNNNAYKCNHCTTTCYMDB
VHKRGAAAGDNGMRTNNNNNNVNNNNN
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF184.RCADE.ReprocessedData
0.823
0.991
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000025687
C2H2 ZF
224
246
CKCNECGKAFSYCSALIRHQRTH
ENSSSCP00000025687
C2H2 ZF
252
274
YKCNECEKAFSRSENLINHQRIH
ENSSSCP00000025687
C2H2 ZF
280
302
YKCDQCGKGFIEGPSLTQHQRIH
ENSSSCP00000025687
C2H2 ZF
308
330
YKCDECGKAFSQRTHLVQHQRIH
ENSSSCP00000025687
C2H2 ZF
336
358
YTCNECGKAFSQRGHFMEHQKIH
ENSSSCP00000025687
C2H2 ZF
364
386
FKCDECDKTFTRSTHLTQHQKIH
ENSSSCP00000025687
C2H2 ZF
392
414
YKCNECGKAFNGPSTFIRHHMIH
ENSSSCP00000025687
C2H2 ZF
420
442
YECNECGKAFSQHSNLTQHQKTH
ENSSSCP00000025687
C2H2 ZF
448
470
YDCAECGKSFSYWSSLAQHLKIH
ENSSSCP00000025687
C2H2 ZF
476
498
YKCNECGKAFSYCSSLTQHRRIH
ENSSSCP00000025687
C2H2 ZF
504
526
FECSECGKAFSYLSNLNQHQKTH
ENSSSCP00000025687
C2H2 ZF
532
554
YECKECGKAFIRSSSLAKHERIH
ENSSSCP00000025687
C2H2 ZF
560
582
YQCHECGKTFSYGSSLIQHRKIH
ENSSSCP00000025687
C2H2 ZF
588
610
YKCNECGRAFNQNIHLTQHKRIH
ENSSSCP00000025687
C2H2 ZF
616
638
YECAECGKAFRHCSSLAQHQKTH
ENSSSCP00000025687
C2H2 ZF
644
666
YQCNKCEKAFSQSSHLAQHQRIH
ENSSSCP00000025687
C2H2 ZF
672
694
YKCNECDKAFSRSTHLTEHQNTH
ENSSSCP00000025687
C2H2 ZF
700
722
YNCNECRKTFSQSTYLIQHQRIH
ENSSSCP00000025687
C2H2 ZF
728
750
FGCNDCGKAFRYRSALSKHQRLH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy