CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HIC1
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000025717
T110538_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HIC1
M04568_2.00
Homo sapiens
NRTGCCMMCN
NGKKGGCAYN
SELEX
Yin et al.(2017)
HIC1_eDBD_HT-SELEX
0.827
1.000
HIC1
M08924_2.00
Homo sapiens
KGGCAMCCH
DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_HUMAN.H11MO.0.C
0.827
1.000
HIC1
M10265_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIC1_02
0.827
1.000
HIC1
M10266_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIC1_03
0.827
1.000
HIC1
M04569_2.00
Homo sapiens
NRTGCCMMCN
NGKKGGCAYN
SELEX
Yin et al.(2017)
HIC1_eDBD_Methyl-HT-SELEX
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000023257
C2H2 ZF
488
510
YRCASCDKSYKDPATLRQHEKTH
ENSSSCP00000023257
C2H2 ZF
516
538
YPCTICGKKFTQRGTMTRHMRSH
ENSSSCP00000023257
C2H2 ZF
544
566
FACDACGMRFTRQYRLTEHMRIH
ENSSSCP00000023257
C2H2 ZF
572
594
YECQVCGGKFAQQRNLISHMKMH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy