CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSSCG00000027766
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000027766
T110568_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF467
M08358_2.00
Homo sapiens
CCCTCCCCCHCC
GGDGGGGGAGGG
ChIP-seq
Schmitges et al.(2016)
Q7Z7K2_3-6.RCADE
0.818
0.957
ZNF467
M08260_2.00
Homo sapiens
YYYCYYYYYYYBYCCCTCCCY
RGGGAGGGRVRRRRRRRGRRR
ChIP-seq
Najafabadi et al.(2015b)
ZNF467
0.818
0.957
ZNF467
M08932_2.00
Homo sapiens
YYYYYYYYYYYYYCYCCTCCCY
RGGGAGGRGRRRRRRRRRRRRR
Misc
Kulakovskiy et al.(2013)
ZN467_HUMAN.H11MO.0.C
0.818
0.957
Zfp467
M10360_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EZI_06
0.818
0.953
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000026491
C2H2 ZF
162
184
YGCGECERRFRDQLTLRLHQRLH
ENSSSCP00000026491
C2H2 ZF
190
212
CACPDCGRSFTQRAHMLLHQRSH
ENSSSCP00000026491
C2H2 ZF
218
240
FPCSECDKRFSKKAHLTRHLRTH
ENSSSCP00000026491
C2H2 ZF
246
268
YPCAECGKRFSQKIHLGSHQKTH
ENSSSCP00000026491
C2H2 ZF
274
296
FPCPECEKRFRKKTHLIRHQRIH
ENSSSCP00000026491
C2H2 ZF
302
324
YQCAQCARSFTHKQHLVRHQRVH
ENSSSCP00000026491
C2H2 ZF
353
375
FSCSDCGLSFSWKKNPATHQGLH
ENSSSCP00000026491
C2H2 ZF
421
443
FFCPDCGRGFAHGQHLARHRRVH
ENSSSCP00000026491
C2H2 ZF
449
471
FACAQCGRRFGSRPNLVAHSRAH
ENSSSCP00000026491
C2H2 ZF
477
499
FACAQCGRRFSRKSHLGRHQAVH
ENSSSCP00000026491
C2H2 ZF
505
527
HACAVCARRFSSKTNLVRHQAIH
ENSSSCP00000026491
C2H2 ZF
533
555
FSCPQCGKSFSRKTHLVRHERIH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy