CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZFP28
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000027774
T110569_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP28
M08378_2.00
Homo sapiens
DNNHNNHNHDDBMKYTCHDTTTCYTYWDNK
NAYMNHWRARGAAAHDGARMKVHHDNDNND
ChIP-seq
Schmitges et al.(2016)
Q8NHY6_2-12.RCADE
0.769
0.938
ZFP28
M08949_2.00
Homo sapiens
YTCTRTTTCTTCTKRWGTCA
TGACWYMAGAAGAAAYAGAR
Misc
Kulakovskiy et al.(2013)
ZFP28_HUMAN.H11MO.0.C
0.769
0.938
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000021180
C2H2 ZF
422
444
FKCNECKKTFTQSSSLTVHQRIH
ENSSSCP00000021180
C2H2 ZF
450
472
YKCNECGKAFSDGSSFARHQRCH
ENSSSCP00000021180
C2H2 ZF
478
501
YECIECGKAFIQNTSLIRHWRYYH
ENSSSCP00000021180
C2H2 ZF
507
529
FDCIDCGKAFSDHIGLNQHRRIH
ENSSSCP00000021180
C2H2 ZF
535
557
YKCDVCDKSFRYGSSLTVHQRIH
ENSSSCP00000021180
C2H2 ZF
563
585
YECDVCRKAFSHHASLTQHQRVH
ENSSSCP00000021180
C2H2 ZF
591
613
FKCKECGKAFRQNIHLASHLRIH
ENSSSCP00000021180
C2H2 ZF
619
641
FECGECGKSFSISSQLATHQRIH
ENSSSCP00000021180
C2H2 ZF
647
669
YECKVCSKAFTQKAHLAQHQKTH
ENSSSCP00000021180
C2H2 ZF
675
697
YECKECGKAFSQTTHLIQHQRVH
ENSSSCP00000021180
C2H2 ZF
703
725
YKCMECGKAFGDNSSCTQHQRLH
ENSSSCP00000021180
C2H2 ZF
731
753
YECLECGKAFKTKSSLICHRRSH
ENSSSCP00000021180
C2H2 ZF
759
781
YECSACGKAFSHRQSLSVHQRIH
ENSSSCP00000021180
C2H2 ZF
787
809
YECKECRKTFIQIGHLNQHKRVH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy