ENSSSCG00000027957 (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000027957 T110572_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF250
M08264_2.00 		Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR		 ChIP-seq
Najafabadi et al.(2015b)
ZNF250 		0.793 0.916
ZNF250
M04619_2.00 		Homo sapiens
NYASGCCYAY
RTRGGCSTRN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX 		0.793 0.916
ZNF250
M08370_2.00 		Homo sapiens
CYYTGCAGB
VCTGCARRG		 ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE 		0.793 0.916
ZNF250
M08944_2.00 		Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA		 Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C 		0.793 0.916
ZNF250
M04620_2.00 		Homo sapiens
NTAGGCCTAN
NTAGGCCTAN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX 		0.793 0.916
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000020062 C2H2 ZF 203 225
ENSSSCP00000020062 C2H2 ZF 231 253
ENSSSCP00000020062 C2H2 ZF 259 281
ENSSSCP00000020062 C2H2 ZF 287 309
ENSSSCP00000020062 C2H2 ZF 315 337
ENSSSCP00000020062 C2H2 ZF 343 365
ENSSSCP00000020062 C2H2 ZF 371 393
ENSSSCP00000020062 C2H2 ZF 399 421
ENSSSCP00000020062 C2H2 ZF 427 449
ENSSSCP00000020062 C2H2 ZF 455 477
ENSSSCP00000020062 C2H2 ZF 483 505
ENSSSCP00000020062 C2H2 ZF 511 533
ENSSSCP00000020062 C2H2 ZF 539 561

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF250 Felis catus ENSFCAG00000013730 I 0.822
ZNF250 Canis familiaris ENSCAFG00000030799 I 0.821
ENSAMEG00000005352 Ailuropoda melanoleuca ENSAMEG00000005352 I 0.821
ENSMPUG00000006008 Mustela putorius furo ENSMPUG00000006008 I 0.820
ZNF250 Erinaceus europaeus ENSEEUG00000004809 I 0.814
ZNF250 Sorex araneus ENSSARG00000004999 I 0.813
Myotis_brandtii_ZNF250_10006488 Myotis brandtii Myotis_brandtii_ZNF250_10006488 I 0.811
ZNF250 Tursiops truncatus ENSTTRG00000013860 I 0.797
ZNF250 Ochotona princeps ENSOPRG00000014807 I 0.797
ZNF250 Otolemur garnettii ENSOGAG00000028856 I 0.796
Zfp647 Dipodomys ordii ENSDORG00000003353 I 0.796
ZNF250 Pteropus vampyrus ENSPVAG00000002855 I 0.796
Zfp647 Rattus norvegicus ENSRNOG00000050661 I 0.795
LOC102555083 Rattus norvegicus ENSRNOG00000050651 I 0.795
Zfp647 Mus musculus ENSMUSG00000054967 I 0.795
ZNF250 Loxodonta africana ENSLAFG00000016670 I 0.795
ENSCSAG00000008192 Chlorocebus sabaeus ENSCSAG00000008192 I 0.793
ZNF250 Homo sapiens ENSG00000196150 D 0.793
ENSCPOG00000001490 Cavia porcellus ENSCPOG00000001490 I 0.793
ENSMMUP00000031824 Macaca fascicularis ENSMMUP00000031824 I 0.793
ZNF250 Callithrix jacchus ENSCJAG00000021381 I 0.793
ZNF250 Macaca mulatta ENSMMUG00000011548 I 0.793
ZNF250 Pan troglodytes ENSPTRG00000023097 I 0.793
ENSPANG00000017990 Papio anubis ENSPANG00000017990 I 0.793
ENSNLEG00000011038 Nomascus leucogenys ENSNLEG00000011038 I 0.793
ENSPPYG00000018996 Pongo abelii ENSPPYG00000018996 I 0.793
ZNF250 Procavia capensis ENSPCAG00000000092 I 0.793
ENSGGOG00000010329 Gorilla gorilla ENSGGOG00000010329 I 0.792
ZNF250 Tupaia belangeri ENSTBEG00000003713 I 0.792
ZNF250 Echinops telfairi ENSETEG00000012126 I 0.791
ZNF250 Dasypus novemcinctus ENSDNOG00000037059 I 0.757