ENSSSCG00000027957 (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000027957 T110572_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF250
M08264_2.00
Homo sapiens
YVDTGCAHTTTTBNB

VNVAAAADTGCAHBR
ChIP-seq
Najafabadi et al.(2015b)
ZNF250
0.793 0.916
ZNF250
M04619_2.00
Homo sapiens
NYASGCCYAY

RTRGGCSTRN
SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX
0.793 0.916
ZNF250
M08370_2.00
Homo sapiens
CYYTGCAGB

VCTGCARRG
ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE
0.793 0.916
ZNF250
M08944_2.00
Homo sapiens
TACCATRCTGTTTTGRTTAC

GTAAYCAAAACAGYATGGTA
Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C
0.793 0.916
ZNF250
M04620_2.00
Homo sapiens
NTAGGCCTAN

NTAGGCCTAN
SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX
0.793 0.916
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000020062 C2H2 ZF 203 225
ENSSSCP00000020062 C2H2 ZF 231 253
ENSSSCP00000020062 C2H2 ZF 259 281
ENSSSCP00000020062 C2H2 ZF 287 309
ENSSSCP00000020062 C2H2 ZF 315 337
ENSSSCP00000020062 C2H2 ZF 343 365
ENSSSCP00000020062 C2H2 ZF 371 393
ENSSSCP00000020062 C2H2 ZF 399 421
ENSSSCP00000020062 C2H2 ZF 427 449
ENSSSCP00000020062 C2H2 ZF 455 477
ENSSSCP00000020062 C2H2 ZF 483 505
ENSSSCP00000020062 C2H2 ZF 511 533
ENSSSCP00000020062 C2H2 ZF 539 561

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

Invalid Input OrderBy

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action