CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSSCG00000028757
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000028757
T110583_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF189
M08311_2.00
Homo sapiens
VDGGAASRGMVDNDSNNN
NNNSHNHBKCYSTTCCHB
ChIP-seq
Schmitges et al.(2016)
O75820_5-10.RCADE
0.827
1.000
ZNF189
M07589_2.00
Homo sapiens
NBKCBSTTCCHB
VDGGAASVGMVN
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF189.RCADE.ReprocessedData
0.827
1.000
ZNF189
M08244_2.00
Homo sapiens
TGGAAAA
TTTTCCA
ChIP-seq
Najafabadi et al.(2015b)
ZNF189
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000023523
C2H2 ZF
95
117
HKCEECGKGFVRKAHFIQHQRVH
ENSSSCP00000023523
C2H2 ZF
123
145
FQCNECGKSFSRSSFVIEHQRIH
ENSSSCP00000023523
C2H2 ZF
151
173
YECNYCGKTFSVSSTLIRHQRIH
ENSSSCP00000023523
C2H2 ZF
179
201
YQCNQCKQSFSQRRSLVKHQRIH
ENSSSCP00000023523
C2H2 ZF
207
229
HKCSDCGKAFSWKSHLIEHQRTH
ENSSSCP00000023523
C2H2 ZF
235
257
YHCTKCKKSFSRNSLLVEHQRIH
ENSSSCP00000023523
C2H2 ZF
263
285
HKCGECGKAFRLSTYLIQHQKIH
ENSSSCP00000023523
C2H2 ZF
291
313
FLCIECGKSFSRSSFLIEHQRIH
ENSSSCP00000023523
C2H2 ZF
319
341
YQCKECGKSFSQLCNLTRHQRIH
ENSSSCP00000023523
C2H2 ZF
347
369
HKCEECGKAFSRSSGLIQHQRIH
ENSSSCP00000023523
C2H2 ZF
403
425
YKCDECGKTFSVSAHLVQHQRIH
ENSSSCP00000023523
C2H2 ZF
431
453
YLCTVCGKSFSRSSFLIEHQRIH
ENSSSCP00000023523
C2H2 ZF
459
481
YLCRQCGKSFSQLCNLIRHQGVH
ENSSSCP00000023523
C2H2 ZF
487
509
HKCDECGKAFSRNSGLIQHQRIH
ENSSSCP00000023523
C2H2 ZF
515
537
YKCEKCDKSFSQQRSLVNHQKIH
ENSSSCP00000023523
C2H2 ZF
546
568
HECDACGEAFNCRISLIQHQKLH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy