ENSSSCG00000030070 (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000030070 T110615_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZBTB18
M02916_2.00
Homo sapiens
VMACATCTGGAWN

NWTCCAGATGTKB
SELEX
Jolma et al.(2013)
ZNF238_1
0.792 0.989
ZBTB18
M02917_2.00
Homo sapiens
NMACATCTGGMHN

NDKCCAGATGTKN
SELEX
Jolma et al.(2013)
ZNF238_2
0.792 0.989
ZBTB18
M04585_2.00
Homo sapiens
NMACATCTGGMHN

NDKCCAGATGTKN
SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX
0.792 0.989
ZBTB18
M08350_2.00
Homo sapiens
MRCAKCTGG

CCAGMTGYK
ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE
0.792 0.989
ZBTB18
M08928_2.00
Homo sapiens
VMRCAKCTGGV

BCCAGMTGYKB
Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C
0.792 0.989
ZBTB18
M10282_2.00
Homo sapiens
NNMACATCTGGM

KCCAGATGTKNN
Transfac
Matys et al.(2006)
V$RP58_01
0.792 0.989
ZBTB18
M10283_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RP58_Q3
0.792 0.989
ZBTB18
M04586_2.00
Homo sapiens
NMACATCTGBHNN

NNDVCAGATGTKN
SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX
0.792 0.989
ZBTB18
M08257_2.00
Homo sapiens
NMGCAGCTGCKB

VMGCAGCTGCKN
ChIP-seq
Najafabadi et al.(2015b)
ZNF238
0.792 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000020814 C2H2 ZF 370 392
ENSSSCP00000020814 C2H2 ZF 411 432
ENSSSCP00000020814 C2H2 ZF 438 460
ENSSSCP00000020814 C2H2 ZF 466 489

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAH70718 Xenopus laevis AAH70718 I 0.792
Aan_R007004 Calypte anna Aan_R007004 I 0.792
Aan_R011644 Calypte anna Aan_R011644 I 0.793
Afo_R000236 Aptenodytes forsteri Afo_R000236 I 0.792
Afo_R004692 Aptenodytes forsteri Afo_R004692 I 0.793
Brh_R000160 Buceros rhinoceros Brh_R000160 I 0.792
Brh_R011012 Buceros rhinoceros Brh_R011012 I 0.793
Cmyd_10012301 Chelonia mydas Cmyd_10012301 I 0.793
Cmyd_10016351 Chelonia mydas Cmyd_10016351 I 0.792
ZBTB18 Anolis carolinensis ENSACAG00000004296 I 0.792
ENSAMEG00000019750 Ailuropoda melanoleuca ENSAMEG00000019750 I 0.792
ENSAMXG00000002993 Astyanax mexicanus ENSAMXG00000002993 I 0.786
ENSAPLG00000002367 Anas platyrhynchos ENSAPLG00000002367 I 0.792
ZBTB18 Bos taurus ENSBTAG00000000385 I 0.792
ENSBTAP00000000497-D1 Bos grunniens ENSBTAP00000000497-D1 I 0.792
ZBTB18 Callithrix jacchus ENSCJAG00000017087 I 0.792
ENSCPOG00000023254 Cavia porcellus ENSCPOG00000023254 I 0.792
zbtb18 Danio rerio ENSDARG00000028228 I 0.786
ZBTB18 Dasypus novemcinctus ENSDNOG00000009334 I 0.792
ENSDORG00000000569 Dipodomys ordii ENSDORG00000000569 I 0.792
ZBTB18 Equus caballus ENSECAG00000018829 I 0.792
ZBTB18 Erinaceus europaeus ENSEEUG00000014181 I 0.792
ENSFALG00000011473 Ficedula albicollis ENSFALG00000011473 I 0.792
ENSFALG00000014898 Ficedula albicollis ENSFALG00000014898 I 0.793
ENSFCAG00000026731 Felis catus ENSFCAG00000026731 I 0.792
ZBTB18 Homo sapiens ENSG00000179456 D 0.792
zbtb18 Gasterosteus aculeatus ENSGACG00000010518 I 0.814
ZBTB18 Gallus gallus ENSGALG00000010705 I 0.792
ZBTB18 Gorilla gorilla ENSGGOG00000028442 I 0.792
ENSGMOG00000018718 Gadus morhua ENSGMOG00000018718 I 0.782
ENSLACG00000009889 Latimeria chalumnae ENSLACG00000009889 I 0.792
ZBTB18 Loxodonta africana ENSLAFG00000002879 I 0.792
ENSLOCG00000017349 Lepisosteus oculatus ENSLOCG00000017349 I 0.787
ENSMEUG00000009369 Macropus eugenii ENSMEUG00000009369 I 0.792
ZBTB18 Meleagris gallopavo ENSMGAG00000011476 I 0.792
ZBTB18 Microcebus murinus ENSMICG00000007600 I 0.792
ZBTB18 Myotis lucifugus ENSMLUG00000011285 I 0.792
ZBTB18 Macaca mulatta ENSMMUG00000015664 I 0.792
ZBTB18 Monodelphis domestica ENSMODG00000006570 I 0.792
ENSMPUG00000015734 Mustela putorius furo ENSMPUG00000015734 I 0.792
Zbtb18 Mus musculus ENSMUSG00000063659 I 0.792
ENSNLEG00000003981 Nomascus leucogenys ENSNLEG00000003981 I 0.788
ZBTB18 Ornithorhynchus anatinus ENSOANG00000010257 I 0.792
ENSOARG00000005939 Ovis aries ENSOARG00000005939 I 0.783
ZBTB18 Oryctolagus cuniculus ENSOCUG00000007968 I 0.792
ZBTB18 Otolemur garnettii ENSOGAG00000013580 I 0.792
ENSONIG00000000862 Oreochromis niloticus ENSONIG00000000862 I 0.814
ENSONIG00000012149 Oreochromis niloticus ENSONIG00000012149 I 0.759
zbtb18 Oryzias latipes ENSORLG00000004823 I 0.814
ENSP00000351539 Macaca fascicularis ENSP00000351539 I 0.792
ENSPANG00000021934 Papio anubis ENSPANG00000021934 I 0.792
ENSPFOG00000022080 Poecilia formosa ENSPFOG00000022080 I 0.814
ENSPPYG00000000059 Pongo abelii ENSPPYG00000000059 I 0.792
ENSPSIG00000000487 Pelodiscus sinensis ENSPSIG00000000487 I 0.792
ZBTB18 Pan troglodytes ENSPTRG00000002175 I 0.792
ZBTB18 Pteropus vampyrus ENSPVAG00000011441 I 0.792
Zfp238 Rattus norvegicus ENSRNOG00000004423 I 0.792
ZBTB18 Sorex araneus ENSSARG00000002984 I 0.792
ENSSHAG00000008659 Sarcophilus harrisii ENSSHAG00000008659 I 0.792
ENSSTOG00000004290 Ictidomys tridecemlineatus ENSSTOG00000004290 I 0.792
ZBTB18 Taeniopygia guttata ENSTGUG00000008247 I 0.792
zbtb18 Tetraodon nigroviridis ENSTNIG00000000430 I 0.814
zbtb18 Takifugu rubripes ENSTRUG00000000952 I 0.814
ENSTSYG00000004607 Tarsius syrichta ENSTSYG00000004607 I 0.792
ZBTB18 Tursiops truncatus ENSTTRG00000000615 I 0.792
ENSXMAG00000018241 Xiphophorus maculatus ENSXMAG00000018241 I 0.814
Gfo_R006792 Geospiza fortis Gfo_R006792 I 0.793
Gfo_R011040 Geospiza fortis Gfo_R011040 I 0.792
Myotis_brandtii_ZNF238_10003031 Myotis brandtii Myotis_brandtii_ZNF238_10003031 I 0.792
Pvit_01078 Pogona vitticeps Pvit_01078 I 0.792
zbtb18 Xenopus tropicalis XB-GENE-1003542 I 0.792
zbtb18.L Xenopus laevis XB-GENE-1003548 I 0.792
znf238.2.L Xenopus laevis XB-GENE-1219070 I 0.802