CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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ENSSSCG00000030445
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000030445
T110619_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF12
M04515_2.00
Homo sapiens
NVYGCKRTAACAARYAKSMCC
GGKSMTRYTTGTTAYMGCRBN
SELEX
Yin et al.(2017)
ZNF12_eDBD_HT-SELEX
0.823
0.974
ZNF12
M07611_2.00
Homo sapiens
BNYBYSTYNYNGCNGCNS
SNGCNGCNRNRASRVRNV
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF12.RCADE.OriginalMapping
0.823
0.974
ZNF12
M04516_2.00
Homo sapiens
NVYGCWRTAACGAGYABCMCC
GGKGVTRCTCGTTAYWGCRBN
SELEX
Yin et al.(2017)
ZNF12_eDBD_Methyl-HT-SELEX
0.823
0.974
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000022232
C2H2 ZF
391
413
YECNACGKSFCKKSKFIIHQRTH
ENSSSCP00000022232
C2H2 ZF
419
441
YECNQCGKSFCQKGTLTVHQRTH
ENSSSCP00000022232
C2H2 ZF
447
469
YECNECGKTFYQKLHLIQHQRTH
ENSSSCP00000022232
C2H2 ZF
475
497
YECSYCGKSFCQKTHLTQHQRTH
ENSSSCP00000022232
C2H2 ZF
503
525
YVCHDCGKTFSQKSALNDHQKIH
ENSSSCP00000022232
C2H2 ZF
531
553
YKCNECGKCFCRKSTLTTHQRTH
ENSSSCP00000022232
C2H2 ZF
559
581
YECNECGKFFSRLSYLTVHYRTH
ENSSSCP00000022232
C2H2 ZF
587
609
YECNECGKTFYLNSALMRHQRVH
ENSSSCP00000022232
C2H2 ZF
615
637
YECNECGKLFSQLSYLTIHHRTH
ENSSSCP00000022232
C2H2 ZF
643
665
YECNECGKTFYQNSALCRHRRIH
ENSSSCP00000022232
C2H2 ZF
671
693
YECYICGKFFSQMSYLTIHHRIH
ENSSSCP00000022232
C2H2 ZF
699
721
YECNECGKTFCQNSALNRHQRTH
ENSSSCP00000022232
C2H2 ZF
727
749
YECYECGKFFSQMSYLTIHHRIH
ENSSSCP00000022232
C2H2 ZF
755
777
FECNECGKAFSRMSYLTVHYRTH
ENSSSCP00000022232
C2H2 ZF
783
805
YECNECGKKFYHKSAFNSHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy