CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSSCG00000030818
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000030818
T110621_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
YY1
M02877_2.00
Homo sapiens
NVSRCCATNDH
DHNATGGYSBN
SELEX
Jolma et al.(2013)
YY1_1
0.822
0.967
YY1
M04406_2.00
Homo sapiens
NDCCATYTTKRRBNDWNHGTGCK
MGCACDNWHNVYYMAARATGGHN
SELEX
Yin et al.(2017)
YY1_FL_HT-SELEX_1
0.822
0.967
YY1
M04407_2.00
Homo sapiens
NKMCGCCATYTTGN
NCAARATGGCGKMN
SELEX
Yin et al.(2017)
YY1_FL_HT-SELEX_2
0.822
0.967
YY1
M05845_2.00
Homo sapiens
NNNVGCCATNWYD
HRWNATGGCBNNN
SMiLE-seq
Isakova et al.(2017)
YY1
0.822
0.967
YY1
M08288_2.00
Homo sapiens
GCCGCCATBKYB
VRMVATGGCGGC
ChIP-seq
Schmitges et al.(2016)
P25490_1-4.RCADE
0.822
0.967
YY1
M08085_2.00
Homo sapiens
KCVGCCATBTTK
MAAVATGGCBGM
ChIP-seq
Mathelier et al.(2014)
MA0095.2
0.822
0.967
YY1
M07855_2.00
Homo sapiens
VNVGCCGCCATBTTK
MAAVATGGCGGCBNB
ChIP-seq
Gerstein et al.(2012)
GM12878_YY1_HudsonAlpha
0.822
0.967
YY1
M07856_2.00
Homo sapiens
GCSGCCATBTT
AAVATGGCSGC
ChIP-seq
Gerstein et al.(2012)
GM12891_YY1_HudsonAlpha
0.822
0.967
YY1
M07857_2.00
Homo sapiens
BSNVGCSGCCATBTT
AAVATGGCSGCBNSV
ChIP-seq
Gerstein et al.(2012)
GM12892_YY1_HudsonAlpha
0.822
0.967
YY1
M07858_2.00
Homo sapiens
NNVGCSGCCATBTTK
MAAVATGGCSGCBNN
ChIP-seq
Gerstein et al.(2012)
H1-hESC_YY1_HudsonAlpha
0.822
0.967
YY1
M07859_2.00
Homo sapiens
SBSGCSGCCATBTTK
MAAVATGGCSGCSVS
ChIP-seq
Gerstein et al.(2012)
K562b_YY1_UCD
0.822
0.967
YY1
M07860_2.00
Homo sapiens
GCCGCCATBTTKNNN
NNNMAAVATGGCGGC
ChIP-seq
Gerstein et al.(2012)
K562_YY1_HudsonAlpha
0.822
0.967
YY1
M07861_2.00
Homo sapiens
VGCSGCCATBTTK
MAAVATGGCSGCB
ChIP-seq
Gerstein et al.(2012)
NT2-D1_YY1_UCD
0.822
0.967
YY1
M08237_2.00
Homo sapiens
VNVGCVGCCATBTTD
HAAVATGGCBGCBNB
ChIP-seq
Najafabadi et al.(2015b)
YY1
0.822
0.967
YY1
M08865_2.00
Homo sapiens
GCCGCCATYTTK
MAARATGGCGGC
Misc
Kulakovskiy et al.(2013)
TYY1_HUMAN.H11MO.0.A
0.822
0.967
Yy1
M08971_2.00
Mus musculus
GCCGCCATBTTB
VAAVATGGCGGC
Misc
Kulakovskiy et al.(2013)
TYY1_MOUSE.H11MO.0.A
0.822
0.967
YY1
M10138_2.00
Homo sapiens
NVNNDCCATNTWNNVWN
NWBNNWANATGGHNNBN
Transfac
Matys et al.(2006)
V$YY1_01
0.822
0.967
YY1
M10139_2.00
Homo sapiens
NNNSBGCCATCTDSNHTSND
HNSADNSHAGATGGCVSNNN
Transfac
Matys et al.(2006)
V$YY1_02
0.822
0.967
YY1
M10140_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_03
0.822
0.967
YY1
M10141_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_07
0.822
0.967
YY1
M10142_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_08
0.822
0.967
YY1
M10143_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_Q4_01
0.822
0.967
YY1
M10144_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_Q6_02
0.822
0.967
YY1
M10145_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_Q6_03
0.822
0.967
YY1
M10146_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_Q6
0.822
0.967
YY1
M04408_2.00
Homo sapiens
NDCCATYTTKRRCDDWWHGTGCY
RGCACDWWHHGYYMAARATGGHN
SELEX
Yin et al.(2017)
YY1_FL_Methyl-HT-SELEX_1
0.822
0.967
YY1
M04409_2.00
Homo sapiens
RKCSGCCATYTTGD
HCAARATGGCSGMY
SELEX
Yin et al.(2017)
YY1_FL_Methyl-HT-SELEX_2
0.822
0.967
TYY2_RAT
M10385_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY2
0.816
0.912
pho
M06053_2.00
Drosophila melanogaster
KNVGCCATDAHNSY
RSNDTHATGGCBNM
B1H
Zhu et al.(2011)
pho_FlyReg_FBgn0002521
0.807
0.934
pho
M06054_2.00
Drosophila melanogaster
KCCGCCATHWTK
MAWDATGGCGGM
B1H
Zhu et al.(2011)
pho_SANGER_10_FBgn0002521
0.807
0.934
pho
M06055_2.00
Drosophila melanogaster
NKBCGCCATHWTKNN
NNMAWDATGGCGVMN
B1H
Zhu et al.(2011)
pho_SOLEXA_5_FBgn0002521
0.807
0.934
phol
M06144_2.00
Drosophila melanogaster
CGCCATHTTK
MAADATGGCG
B1H
Zhu et al.(2011)
phol_SANGER_5_FBgn0035997
0.764
0.824
phol
M06145_2.00
Drosophila melanogaster
NKNCGCCATNTTKNN
NNMAANATGGCGNMN
B1H
Zhu et al.(2011)
phol_SOLEXA_5_FBgn0035997
0.764
0.824
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000029198
C2H2 ZF
403
426
ACAHKGCPKMFRDNSAMRKHLHTH
ENSSSCP00000029198
C2H2 ZF
431
453
HVCAECGKAFVESSKLKRHQLVH
ENSSSCP00000029198
C2H2 ZF
459
483
FQCTFEGCGKRFSLDFNLRTHVRIH
ENSSSCP00000029198
C2H2 ZF
489
513
YVCPFDCCNKKFAQSTNLKSHILTH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
164 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSSSCG00000030865
Sus scrofa
ENSSSCG00000030865
I
0.827
GB49343
Apis mellifera
GB49343
I
0.822
HMEL010415
Heliconius melpomene
HMEL010415
I
0.822
CpipJ_CPIJ014689
Culex pipiens
CpipJ_CPIJ014689
I
0.822
KGM_02499
Danaus plexippus
KGM_02499
I
0.822
ENSXMAG00000013413
Xiphophorus maculatus
ENSXMAG00000013413
I
0.822
ENSXMAG00000008440
Xiphophorus maculatus
ENSXMAG00000008440
I
0.822
L798_03352
Zootermopsis nevadensis
L798_03352
I
0.822
SINV16765
Solenopsis invicta
SINV16765
I
0.822
SMAR005684
Strigamia maritima
SMAR005684
I
0.822
RPRC009167
Rhodnius prolixus
RPRC009167
I
0.822
NV10061
Nasonia vitripennis
NV10061
I
0.822
NEMVEDRAFT_v1g118750
Nematostella vectensis
NEMVEDRAFT_v1g118750
I
0.822
yy1a
Takifugu rubripes
ENSTRUG00000012579
I
0.822
YY2
Tetraodon nigroviridis
ENSTNIG00000010738
I
0.822
ENSPFOG00000007704
Poecilia formosa
ENSPFOG00000007704
I
0.822
ENSPMAG00000006025
Petromyzon marinus
ENSPMAG00000006025
I
0.822
ENSPFOG00000002300
Poecilia formosa
ENSPFOG00000002300
I
0.822
ENSPANG00000009274
Papio anubis
ENSPANG00000009274
I
0.822
yy1a
Oryzias latipes
ENSORLG00000015640
I
0.822
ENSPPYG00000025949
Pongo abelii
ENSPPYG00000025949
I
0.822
ENSPSIG00000016003
Pelodiscus sinensis
ENSPSIG00000016003
I
0.822
ENSTGUG00000012753
Taeniopygia guttata
ENSTGUG00000012753
I
0.822
SPU_010295
Strongylocentrotus purpuratus
SPU_010295
I
0.822
ENSSHAG00000014750
Sarcophilus harrisii
ENSSHAG00000014750
I
0.822
Yy1
Rattus norvegicus
ENSRNOG00000004339
I
0.822
YY1
Pan troglodytes
ENSPTRG00000006717
I
0.822
yy1a
Tetraodon nigroviridis
ENSTNIG00000017334
I
0.822
TC015577
Tribolium castaneum
TC015577
I
0.822
yy1.L
Xenopus laevis
XB-GENE-6254435
I
0.822
yy1
Xenopus tropicalis
XB-GENE-961263
I
0.822
HHAL002529-PA
Halyomorpha halys
HHAL002529-PA
I
0.822
CLEC004566
Cimex lectularius
CLEC004566
I
0.822
Sakowv30026333m.g
Saccoglossus kowalevskii
Sakowv30026333m.g
I
0.822
yy1.S
Xenopus laevis
XB-GENE-961267
I
0.822
AALB001578
Anopheles albimanus
AALB001578
I
0.822
LLOJ009958
Lutzomyia longipalpis
LLOJ009958
I
0.822
PPAI004379
Phlebotomus papatasi
PPAI004379
I
0.822
ASIS015128
Anopheles sinensis
ASIS015128
I
0.822
AMEC007067
Anopheles melas
AMEC007067
I
0.822
AFUN003297
Anopheles funestus
AFUN003297
I
0.822
gw.8.511.1
Branchiostoma floridae
gw.8.511.1
I
0.822
e_gw.8.110.1
Branchiostoma floridae
e_gw.8.110.1
I
0.822
Alligator_sinensis_CCG004251.1
Alligator sinensis
Alligator_sinensis_CCG004251.1
I
0.822
Brh_R004031
Buceros rhinoceros
Brh_R004031
I
0.822
Afo_R004638
Aptenodytes forsteri
Afo_R004638
I
0.822
Aan_R011513
Calypte anna
Aan_R011513
I
0.822
YQE_09404
Dendroctonus ponderosae
YQE_09404
I
0.822
Cflo_10375--XP_392196.2_APIME
Camponotus floridanus
Cflo_10375--XP_392196.2_APIME
I
0.822
Cflo_15890--XP_392196.2_APIME
Camponotus floridanus
Cflo_15890--XP_392196.2_APIME
I
0.822
Tal_R000269
Tyto alba
Tal_R000269
I
0.822
yakG036002
Bos grunniens
yakG036002
I
0.822
Pvit_14266
Pogona vitticeps
Pvit_14266
I
0.822
Myotis_brandtii_YY1_10025332
Myotis brandtii
Myotis_brandtii_YY1_10025332
I
0.822
Gfo_R006742
Geospiza fortis
Gfo_R006742
I
0.822
YY2
Oryzias latipes
ENSORLG00000009449
I
0.822
YY2
Takifugu rubripes
ENSTRUG00000010532
I
0.822
YY2
Echinops telfairi
ENSETEG00000010999
I
0.822
ENSFALG00000002683
Ficedula albicollis
ENSFALG00000002683
I
0.822
ENSECAG00000005805
Equus caballus
ENSECAG00000005805
I
0.822
ENSDNOG00000023949
Dasypus novemcinctus
ENSDNOG00000023949
I
0.822
yy1b
Danio rerio
ENSDARG00000027978
I
0.822
yy1a
Danio rerio
ENSDARG00000042796
I
0.822
YY1
Felis catus
ENSFCAG00000024327
I
0.822
YY1
Homo sapiens
ENSG00000100811
D
0.822
YY1
Gorilla gorilla
ENSGGOG00000026332
I
0.822
ENSGMOG00000010949
Gadus morhua
ENSGMOG00000010949
I
0.822
YY1
Gallus gallus
ENSGALG00000017388
I
0.822
ENSONIG00000020108
Oreochromis niloticus
ENSONIG00000020108
I
0.822
yy1a
Gasterosteus aculeatus
ENSGACG00000008573
I
0.822
ENSCPOG00000020809
Cavia porcellus
ENSCPOG00000020809
I
0.822
ENSCJAG00000016853
Callithrix jacchus
ENSCJAG00000016853
I
0.822
CPIJ014689
Culex quinquefasciatus
CPIJ014689
I
0.822
DAPPUDRAFT_59123
Daphnia pulex
DAPPUDRAFT_59123
I
0.822
BGIBMGA011179
Bombyx mori
BGIBMGA011179
I
0.822
ADAC004141
Anopheles darlingi
ADAC004141
I
0.822
ACEP14480
Atta cephalotes
ACEP14480
I
0.822
ENSACAG00000013402
Anolis carolinensis
ENSACAG00000013402
I
0.822
ENSAMEG00000011146
Ailuropoda melanoleuca
ENSAMEG00000011146
I
0.822
YY1
Bos taurus
ENSBTAG00000020819
I
0.822
YY1
Canis familiaris
ENSCAFG00000017894
I
0.822
ENSAPLG00000003589
Anas platyrhynchos
ENSAPLG00000003589
I
0.822
ENSAMXG00000013302
Astyanax mexicanus
ENSAMXG00000013302
I
0.822
ENSAMXG00000006146
Astyanax mexicanus
ENSAMXG00000006146
I
0.822
ENSGMOG00000011803
Gadus morhua
ENSGMOG00000011803
I
0.822
ENSGACG00000012595
Gasterosteus aculeatus
ENSGACG00000012595
I
0.822
YY2
Macaca mulatta
ENSMMUG00000029197
I
0.822
ENSMODG00000013124
Monodelphis domestica
ENSMODG00000013124
I
0.822
ENSLAFG00000032414
Loxodonta africana
ENSLAFG00000032414
I
0.822
ENSMLUG00000024984
Myotis lucifugus
ENSMLUG00000024984
I
0.822
YY1
Microcebus murinus
ENSMICG00000006698
I
0.822
ENSLOCG00000011626
Lepisosteus oculatus
ENSLOCG00000011626
I
0.822
ENSMGAG00000013304
Meleagris gallopavo
ENSMGAG00000013304
I
0.822
ENSMPUG00000002931
Mustela putorius furo
ENSMPUG00000002931
I
0.822
Yy1
Mus musculus
ENSMUSG00000021264
D
0.822
ENSOCUG00000026938
Oryctolagus cuniculus
ENSOCUG00000026938
I
0.822
ENSOGAG00000006955
Otolemur garnettii
ENSOGAG00000006955
I
0.822
ENSONIG00000000896
Oreochromis niloticus
ENSONIG00000000896
I
0.822
ENSNLEG00000000999
Nomascus leucogenys
ENSNLEG00000000999
I
0.822
ENSOANG00000005723
Ornithorhynchus anatinus
ENSOANG00000005723
I
0.822
ACYPI007734
Acyrthosiphon pisum
ACYPI007734
I
0.819
PHUM284920
Pediculus humanus
PHUM284920
I
0.819
LCUP013338
Lucilia cuprina
LCUP013338
I
0.819
YY2
Tupaia belangeri
ENSTBEG00000011527
I
0.817
TYY2_RAT
Rattus norvegicus
TYY2_RAT
D
0.816
Yy2
Mus musculus
ENSMUSG00000091736
I
0.816
Mbtps2
Mus musculus
ENSMUSG00000046873
I
0.816
CapteG223122
Capitella teleta
CapteG223122
I
0.810
CGI_10027862
Crassostrea gigas
CGI_10027862
I
0.810
Ocbimv22034269m.g
Octopus bimaculoides
Ocbimv22034269m.g
I
0.810
tetur09g00290
Tetranychus urticae
tetur09g00290
I
0.810
ENSDORG00000009642
Dipodomys ordii
ENSDORG00000009642
I
0.810
LotgiG64240
Lottia gigantea
LotgiG64240
I
0.810
tetur09g00130
Tetranychus urticae
tetur09g00130
I
0.810
YY2
Erinaceus europaeus
ENSEEUG00000010704
I
0.809
GH23956
Drosophila grimshawi
FBgn0131413
I
0.807
ENSAMEG00000016465
Ailuropoda melanoleuca
ENSAMEG00000016465
I
0.807
GE14485
Drosophila yakuba
FBgn0232089
I
0.807
GK13655
Drosophila willistoni
FBgn0215663
I
0.807
GM13006
Drosophila sechellia
FBgn0167937
I
0.807
GJ12430
Drosophila virilis
FBgn0199672
I
0.807
Ogr05382
Ophisaurus gracilis
Ogr05382
I
0.807
GG16416
Drosophila erecta
FBgn0108648
I
0.807
pho
Drosophila melanogaster
FBgn0002521
D
0.807
Cmyd_10012120
Chelonia mydas
Cmyd_10012120
I
0.807
pho
Drosophila simulans
FBgn0067492
I
0.807
EmuJ_000476600
Echinococcus multilocularis
EmuJ_000476600
I
0.799
TASK_0000670101
Taenia asiatica
TASK_0000670101
I
0.799
HmN_000280700
Hymenolepis microstoma
HmN_000280700
I
0.799
TsM_000985500
Taenia solium
TsM_000985500
I
0.799
HNAJ_0000292901
Hymenolepis nana
HNAJ_0000292901
I
0.799
ECANG7_03870
Echinococcus canadensis
ECANG7_03870
I
0.799
TTAC_0000757501
Hydatigera taeniaeformis
TTAC_0000757501
I
0.799
T265_10224
Opisthorchis viverrini
T265_10224
I
0.795
csin103138
Clonorchis sinensis
csin103138
I
0.795
YY2
Monodelphis domestica
ENSMODG00000028019
I
0.792
YY2
Equus caballus
ENSECAG00000014804
I
0.792
Smp_023990
Schistosoma mansoni
Smp_023990
I
0.790
DILT_0000781101
Diphyllobothrium latum
DILT_0000781101
I
0.790
SCUD_0001683801
Schistosoma curassoni
SCUD_0001683801
I
0.790
MCOS_0000134601
Mesocestoides corti
MCOS_0000134601
I
0.790
A_01567
Schistosoma haematobium
A_01567
I
0.790
TRE_0001085901
Trichobilharzia regenti
TRE_0001085901
I
0.790
ECPE_0001146401
Echinostoma caproni
ECPE_0001146401
I
0.790
SROB_0002127201
Schistosoma rodhaini
SROB_0002127201
I
0.790
SMTD_0001163901
Schistosoma mattheei
SMTD_0001163901
I
0.790
D915_12088
Fasciola hepatica
D915_12088
I
0.790
ENSSHAG00000010068
Sarcophilus harrisii
ENSSHAG00000010068
I
0.780
GF24664
Drosophila ananassae
FBgn0101657
I
0.764
GH16213
Drosophila grimshawi
FBgn0123684
I
0.764
GI13359
Drosophila mojavensis
FBgn0136116
I
0.764
GG14036
Drosophila erecta
FBgn0106298
I
0.764
GA17456
Drosophila pseudoobscura
FBgn0077467
I
0.764
phol
Drosophila melanogaster
FBgn0035997
D
0.764
GM24870
Drosophila sechellia
FBgn0179732
I
0.764
GL17968
Drosophila persimilis
FBgn0155571
I
0.764
GE21239
Drosophila yakuba
FBgn0238511
I
0.764
GJ13188
Drosophila virilis
FBgn0200414
I
0.764
GK20506
Drosophila willistoni
FBgn0222503
I
0.764
GD12921
Drosophila simulans
FBgn0184646
I
0.764
MDOA004058
Musca domestica
MDOA004058
I
0.762
LCUP010826
Lucilia cuprina
LCUP010826
I
0.762
ENSCING00000018982
Ciona intestinalis
ENSCING00000018982
I
0.758
ENSCSAVG00000003120
Ciona savignyi
ENSCSAVG00000003120
I
0.758