CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000001467
(
Ictidomys tridecemlineatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSTOG00000001467
T110638_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF582
M08274_2.00
Homo sapiens
KYMSYTGCMGCCNARNGCAYBCYHNNN
NNNDRGVRTGCNYTNGGCKGCARSKRM
ChIP-seq
Schmitges et al.(2016)
Q96NG8_1-9.RCADE
0.782
0.923
ZNF582
M07564_2.00
Homo sapiens
GCKTNCNCABVCSHMGRMATKYCAGAGG
CCTCTGRMATKYCKDSGBVTGNGNAMGC
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF582.MEME.OriginalMapping
0.782
0.923
ZNF582
M08852_2.00
Homo sapiens
GWTRHTTSCAKYCVANTSCATTMS
SKAATGSANTBGRMTGSAADYAWC
Misc
Kulakovskiy et al.(2013)
ZN582_HUMAN.H11MO.0.C
0.782
0.923
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000001312
C2H2 ZF
191
213
YKCKECGKAFKYGSRLIQHENIH
ENSSTOP00000001312
C2H2 ZF
219
241
YECKQCGKAFNSGSNFIQHQRVH
ENSSTOP00000001312
C2H2 ZF
247
269
YECRDCAKAFSRSSQLIEHQRIH
ENSSTOP00000001312
C2H2 ZF
275
297
YQCKECGKAFNRISHLKVHYRTH
ENSSTOP00000001312
C2H2 ZF
303
325
YACKECGKTFSHRSQLIQHQTVH
ENSSTOP00000001312
C2H2 ZF
331
353
YECKECGKAFNQGSTLIRHQRIH
ENSSTOP00000001312
C2H2 ZF
359
381
YECKVCGKAFRVSSQLRQHQRIH
ENSSTOP00000001312
C2H2 ZF
387
409
YQCKVCSRAFKRVSHLTVHHRTH
ENSSTOP00000001312
C2H2 ZF
415
437
YDCTQCGKAFSHCSQLVQHQASH
Links
Other
C2H2 ZF
family TFs
Other
Ictidomys tridecemlineatus
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy