CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000002432
(
Ictidomys tridecemlineatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSTOG00000002432
T110647_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF558
M07620_2.00
Homo sapiens
HKGRAYHTGTRGRTKBATRYCTTYCAK
MTGRAAGRYATVMAYCYACADRTYCMD
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF558.RCADE.ReprocessedData
0.826
0.976
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000002173
C2H2 ZF
123
144
ECNQCFKVFSTKSNLTQHKRIH
ENSSTOP00000002173
C2H2 ZF
150
172
YDCNQCGKSFSSRSYLTIHRRIH
ENSSTOP00000002173
C2H2 ZF
178
200
YECNHCGKAFSDPSSLRLHVRIH
ENSSTOP00000002173
C2H2 ZF
206
228
YECNQCFHVFRTSCNLKSHKRIH
ENSSTOP00000002173
C2H2 ZF
234
256
HECNQCGKAFSTRSSLTGHNSIH
ENSSTOP00000002173
C2H2 ZF
262
284
YECHDCGKAFRKSSYLTQHVRTH
ENSSTOP00000002173
C2H2 ZF
290
312
YECNECRKSFSSSFSLTVHKRIH
ENSSTOP00000002173
C2H2 ZF
318
340
YECSDCGKAFNNLSAVKKHLRTH
ENSSTOP00000002173
C2H2 ZF
346
368
YECNHCGKSFTSNSYLSVHKRIH
Links
Other
C2H2 ZF
family TFs
Other
Ictidomys tridecemlineatus
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy