CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000013384
(
Ictidomys tridecemlineatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSTOG00000013384
T110764_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF398
M07716_2.00
Homo sapiens
CTSYYTCYYTCCCH
DGGGARRGARRSAG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF398.ChIP-seq.ReprocessedData
0.813
0.956
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000011990
C2H2 ZF
204
225
FSCHHCGKSLNQDMLLTHQCGH
ENSSTOP00000011990
C2H2 ZF
260
281
TCPHCARTFTHPSRLTYHLRVH
ENSSTOP00000011990
C2H2 ZF
288
310
FPCPDCPKRFADQARLTSHRRAH
ENSSTOP00000011990
C2H2 ZF
316
338
FRCTQCGRSFSLKISLLLHQRGH
ENSSTOP00000011990
C2H2 ZF
344
366
FSCPQCGIDFNGHSALIRHQMIH
ENSSTOP00000011990
C2H2 ZF
372
394
YPCTDCSKSFMRKEHLLNHRRLH
ENSSTOP00000011990
C2H2 ZF
400
422
FQCAHCGKSFIRKHHLMKHQRIH
ENSSTOP00000011990
C2H2 ZF
428
451
YPCALCGRSFRYKQTLKDHLRSGH
Links
Other
C2H2 ZF
family TFs
Other
Ictidomys tridecemlineatus
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy