CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000022317
(
Ictidomys tridecemlineatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSTOG00000022317
T110868_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP1
M04601_2.00
Homo sapiens
NTWYYATACCYWGCH
DGCWRGGTATRRWAN
SELEX
Yin et al.(2017)
ZFP1_eDBD_HT-SELEX
0.820
0.989
ZFP1
M05854_2.00
Homo sapiens
CCWRCHMAACTAWCC
GGWTAGTTKDGYWGG
SMiLE-seq
Isakova et al.(2017)
ZFP1_1
0.820
0.989
ZFP1
M05855_2.00
Homo sapiens
NTDYBATACCCANHH
DDNTGGGTATVRHAN
SMiLE-seq
Isakova et al.(2017)
ZFP1_2
0.820
0.989
ZFP1
M07670_2.00
Homo sapiens
YNMNTWTTATACCCARCCCWNMTRKCCM
KGGMYAKNWGGGYTGGGTATAAWANKNR
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZFP1.MEME.OriginalMapping
0.820
0.989
ZFP1
M04602_2.00
Homo sapiens
NTWYYATACCYWRCH
DGYWRGGTATRRWAN
SELEX
Yin et al.(2017)
ZFP1_eDBD_Methyl-HT-SELEX
0.820
0.989
Zfp1
M10357_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP1_02
0.808
0.957
Zfp1
M10358_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP1_03
0.808
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000018495
C2H2 ZF
181
203
FLCNYCDKAFSFKSLLISHKRIH
ENSSTOP00000018495
C2H2 ZF
209
231
YECNVCKKTFSHKANLIKHQRIH
ENSSTOP00000018495
C2H2 ZF
237
259
FECPECGKAFTHQSNLIVHQRAH
ENSSTOP00000018495
C2H2 ZF
265
287
YECSECGKTFAQKFELTTHQRIH
ENSSTOP00000018495
C2H2 ZF
293
315
YECNECAKTFFKKSNLIIHQKIH
ENSSTOP00000018495
C2H2 ZF
321
343
YECSECGKSFIQNSQLIIHMRTH
ENSSTOP00000018495
C2H2 ZF
349
371
YECTECGKTFSQRSTLRLHLRIH
ENSSTOP00000018495
C2H2 ZF
377
399
YECSECGKAFSRKSRLSVHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Ictidomys tridecemlineatus
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy