CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000023212
(
Ictidomys tridecemlineatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSTOG00000023212
T110886_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF248
M07739_2.00
Homo sapiens
NYNTYVMTGRAYATDGKHHDY
RHDDMCHATRTYCAKBRANRN
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF248.RCADE.OriginalMapping
0.824
0.988
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000023629
C2H2 ZF
374
396
FECGECGKTFWEKSNLTQHQRTH
ENSSTOP00000023629
C2H2 ZF
402
424
YECTECGKAFCQKPHLTNHQRTH
ENSSTOP00000023629
C2H2 ZF
430
452
YECKQCGKTFCVKSNLTEHQRTH
ENSSTOP00000023629
C2H2 ZF
458
480
YECSACGKSFCHRSALTVHQRTH
ENSSTOP00000023629
C2H2 ZF
486
508
FICNECGKSFCVKSNLIVHQRTH
ENSSTOP00000023629
C2H2 ZF
514
536
YKCNECGKTFCEKSALTKHQRTH
ENSSTOP00000023629
C2H2 ZF
542
564
YECTACGKTFSQRSVLTKHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Ictidomys tridecemlineatus
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy