CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000027399
(
Ictidomys tridecemlineatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSTOG00000027399
T110961_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZIC5
M04471_2.00
Homo sapiens
NKACCCCCCGCTGHGH
DCDCAGCGGGGGGTMN
SELEX
Yin et al.(2017)
ZIC5_eDBD_HT-SELEX
0.827
1.000
ZIC5
M04472_2.00
Homo sapiens
NKACCCCCYGCTGTGM
KCACAGCRGGGGGTMN
SELEX
Yin et al.(2017)
ZIC5_eDBD_Methyl-HT-SELEX
0.827
1.000
Zic5
M00780_2.00
Mus musculus
BRCCCCCYDS
SHRGGGGGYV
PBM
Weirauch et al.(2013)
pTH2818
0.818
0.991
Zic3
M00151_2.00
Mus musculus
NCMYVBNRNB
VNYNVBRKGN
PBM
Badis et al.(2009)
Zic3_3119
0.763
0.864
ZIC3
M02894_2.00
Homo sapiens
BACCCCCYGCKGYGH
DCRCMGCRGGGGGTV
SELEX
Jolma et al.(2013)
ZIC3_1
0.763
0.864
Zic3
M02936_2.00
Mus musculus
KRCCCCCYGCTGYGH
DCRCAGCRGGGGGYM
SELEX
Jolma et al.(2013)
Zic3_1
0.763
0.864
ZIC3
M04491_2.00
Homo sapiens
VGACCCCCYGCTGTGM
KCACAGCRGGGGGTCB
SELEX
Yin et al.(2017)
ZIC3_eDBD_HT-SELEX
0.763
0.864
ZIC3
M04493_2.00
Homo sapiens
BACCCCCYGCTGYGH
DCRCAGCRGGGGGTV
SELEX
Yin et al.(2017)
ZIC3_FL_HT-SELEX
0.763
0.864
ZIC3
M08902_2.00
Homo sapiens
NVVYHCCTGCTGDGN
NCHCAGCAGGDRBBN
Misc
Kulakovskiy et al.(2013)
ZIC3_HUMAN.H11MO.0.B
0.763
0.864
Zic3
M09013_2.00
Mus musculus
NVVYHCCTGCTGDGN
NCHCAGCAGGDRBBN
Misc
Kulakovskiy et al.(2013)
ZIC3_MOUSE.H11MO.0.A
0.763
0.864
ZIC3
M10229_2.00
Homo sapiens
VRBCMCCCN
NGGGKGVYB
Transfac
Matys et al.(2006)
V$ZIC3_01
0.763
0.864
Zic3
M10359_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZIC3_07
0.763
0.864
ZIC3
M04492_2.00
Homo sapiens
NKACCCCCTGCTGTGM
KCACAGCAGGGGGTMN
SELEX
Yin et al.(2017)
ZIC3_eDBD_Methyl-HT-SELEX
0.763
0.864
ZIC3
M04494_2.00
Homo sapiens
BRCCCCCTGCTGTGM
KCACAGCAGGGGGYV
SELEX
Yin et al.(2017)
ZIC3_FL_Methyl-HT-SELEX
0.763
0.864
Zic1
M00137_2.00
Mus musculus
NCMYVBNGNK
MNCNVBRKGN
PBM
Badis et al.(2009)
Zic1_0991
0.759
0.900
ZIC1
M02893_2.00
Homo sapiens
KRCCCCCYGCTGYG
CRCAGCRGGGGGYM
SELEX
Jolma et al.(2013)
ZIC1_1
0.759
0.900
ZIC1
M04485_2.00
Homo sapiens
BVCCMCCYGYHGYGH
DCRCDRCRGGKGGBV
SELEX
Yin et al.(2017)
ZIC1_eDBD_HT-SELEX
0.759
0.900
ZIC1
M04487_2.00
Homo sapiens
BVCCCCCYGCTGYGH
DCRCAGCRGGGGGBV
SELEX
Yin et al.(2017)
ZIC1_FL_HT-SELEX
0.759
0.900
ZIC1
M08900_2.00
Homo sapiens
BMSCHCCCM
KGGGDGSKV
Misc
Kulakovskiy et al.(2013)
ZIC1_HUMAN.H11MO.0.B
0.759
0.900
Zic1
M08990_2.00
Mus musculus
BMSCHCCCM
KGGGDGSKV
Misc
Kulakovskiy et al.(2013)
ZIC1_MOUSE.H11MO.0.B
0.759
0.900
ZIC1
M10226_2.00
Homo sapiens
KRCNMMCYV
BRGKKNGTM
Transfac
Matys et al.(2006)
V$ZIC1_01
0.759
0.900
ZIC1
M10227_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZIC1_Q2
0.759
0.900
ZIC1
M04486_2.00
Homo sapiens
BACCCCCYRCTGTGM
KCACAGYRGGGGGTV
SELEX
Yin et al.(2017)
ZIC1_eDBD_Methyl-HT-SELEX
0.759
0.900
ZIC1
M04488_2.00
Homo sapiens
BRCCCCCTGCTGTGH
DCACAGCAGGGGGYV
SELEX
Yin et al.(2017)
ZIC1_FL_Methyl-HT-SELEX
0.759
0.900
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000016263
C2H2 ZF
3
21
CSKTFGTMHELVNHVTVEH
ENSSTOP00000016263
C2H2 ZF
30
57
HVCFWEDCPREGKPFKAKYKLINHIRVH
ENSSTOP00000016263
C2H2 ZF
63
87
FPCPFPGCGKVFARSENLKIHKRTH
ENSSTOP00000016263
C2H2 ZF
93
117
FKCEFDGCDRKFANSSDRKKHSHVH
ENSSTOP00000016263
C2H2 ZF
123
147
YYCKIRGCDKSYTHPSSLRKHMKIH
ENSSTOP00000017310
C2H2 ZF
481
505
FKCEFDGCDRKFANSSDRKKHSHVH
ENSSTOP00000017310
C2H2 ZF
511
535
YYCKIRGCDKSYTHPSSLRKHMKIH
Links
Other
C2H2 ZF
family TFs
Other
Ictidomys tridecemlineatus
TFs
201 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSOARG00000004385
Ovis aries
ENSOARG00000004385
I
0.827
ENSNLEG00000007807
Nomascus leucogenys
ENSNLEG00000007807
I
0.827
Myotis_brandtii_Zic5_10007324
Myotis brandtii
Myotis_brandtii_Zic5_10007324
N
0.827
ZIC5
Gorilla gorilla
ENSGGOG00000022385
I
0.827
Alligator_sinensis_CCG018454.1
Alligator sinensis
Alligator_sinensis_CCG018454.1
N
0.827
ZIC5
Otolemur garnettii
ENSOGAG00000024269
N
0.827
ENSCPOG00000025550
Cavia porcellus
ENSCPOG00000025550
N
0.827
ZIC5
Dasypus novemcinctus
ENSDNOG00000046390
I
0.827
ENSMPUG00000011382
Mustela putorius furo
ENSMPUG00000011382
N
0.827
ZIC5
Loxodonta africana
ENSLAFG00000009640
N
0.827
ENSLACG00000015786
Latimeria chalumnae
ENSLACG00000015786
N
0.827
ZIC5
Homo sapiens
ENSG00000139800
D
0.827
ENSMLUG00000027631
Myotis lucifugus
ENSMLUG00000027631
N
0.827
ZIC5
Macaca mulatta
ENSMMUG00000014821
I
0.827
ZIC5
Erinaceus europaeus
ENSEEUG00000002965
I
0.827
ENSCJAG00000020987
Callithrix jacchus
ENSCJAG00000020987
I
0.827
ENSCSAG00000017495
Chlorocebus sabaeus
ENSCSAG00000017495
I
0.827
ENSPTRG00000034285
Pan troglodytes
ENSPTRG00000034285
I
0.827
ENSAMEG00000004500
Ailuropoda melanoleuca
ENSAMEG00000004500
I
0.827
ENSSHAG00000004201
Sarcophilus harrisii
ENSSHAG00000004201
N
0.827
ZIC5
Procavia capensis
ENSPCAG00000011845
I
0.827
Zic5
Rattus norvegicus
ENSRNOG00000014358
I
0.827
ZIC5
Canis familiaris
ENSCAFG00000005834
I
0.827
ENSPANG00000018055
Papio anubis
ENSPANG00000018055
I
0.827
ENSMEUG00000004592
Macropus eugenii
ENSMEUG00000004592
I
0.825
ZIC5
Monodelphis domestica
ENSMODG00000007733
I
0.825
ENSPSIG00000009089
Pelodiscus sinensis
ENSPSIG00000009089
I
0.823
ENSLOCG00000003087
Lepisosteus oculatus
ENSLOCG00000003087
I
0.821
ENSAMXG00000002323
Astyanax mexicanus
ENSAMXG00000002323
I
0.821
zic5
Xenopus tropicalis
XB-GENE-480775
I
0.817
ENSONIG00000006787
Oreochromis niloticus
ENSONIG00000006787
I
0.816
ENSXMAG00000010996
Xiphophorus maculatus
ENSXMAG00000010996
I
0.816
zic5
Oryzias latipes
ENSORLG00000011124
I
0.816
ENSPFOG00000012158
Poecilia formosa
ENSPFOG00000012158
I
0.816
D917_03218
Trichinella nativa
D917_03218
N
0.812
zic5
Danio rerio
ENSDARG00000016022
I
0.811
Pvit_14046
Pogona vitticeps
Pvit_14046
I
0.810
zic5
Takifugu rubripes
ENSTRUG00000011797
I
0.806
zic5
Tetraodon nigroviridis
ENSTNIG00000014980
I
0.806
zic5.S
Xenopus laevis
XB-GENE-865408
I
0.803
MESCA007328
Megaselia scalaris
MESCA007328
N
0.798
ENSXMAG00000013401
Xiphophorus maculatus
ENSXMAG00000013401
N
0.794
Ocbimv22019249m.g
Octopus bimaculoides
Ocbimv22019249m.g
N
0.794
ENSECAG00000013406
Equus caballus
ENSECAG00000013406
I
0.790
Gfo_R008500
Geospiza fortis
Gfo_R008500
N
0.788
LDEC018872
Leptinotarsa decemlineata
LDEC018872
N
0.788
ZIC3
Macaca mulatta
ENSMMUG00000002023
N
0.788
LCUP010714
Lucilia cuprina
LCUP010714
N
0.788
CLEC011939
Cimex lectularius
CLEC011939
N
0.788
YQE_06158
Dendroctonus ponderosae
YQE_06158
N
0.788
ENSMEUG00000007408
Macropus eugenii
ENSMEUG00000007408
N
0.788
ZIC1
Homo sapiens
ENSG00000152977
D
0.788
AEPI009631
Anopheles epiroticus
AEPI009631
N
0.788
AMAM021135
Anopheles maculatus
AMAM021135
N
0.788
PPAI004317
Phlebotomus papatasi
PPAI004317
N
0.788
ADIR009951
Anopheles dirus
ADIR009951
N
0.788
ASTEI05791
Anopheles stephensi
ASTEI05791
N
0.788
AALB009198
Anopheles albimanus
AALB009198
N
0.788
AARA001756
Anopheles arabiensis
AARA001756
N
0.788
CGI_10016116
Crassostrea gigas
CGI_10016116
I
0.786
scaffold799-EXSNAP2012.6
Pristionchus exspectatus
scaffold799-EXSNAP2012.6
N
0.781
ENSONIG00000005875
Oreochromis niloticus
ENSONIG00000005875
I
0.771
ENSPFOG00000013981
Poecilia formosa
ENSPFOG00000013981
I
0.771
ZIC4
Homo sapiens
ENSG00000174963
D
0.770
zic1
Oryzias latipes
ENSORLG00000010050
I
0.769
CapteG160442
Capitella teleta
CapteG160442
I
0.768
estExt_gwp.C_400285
Branchiostoma floridae
estExt_gwp.C_400285
I
0.768
GPLIN_000910900
Globodera pallida
GPLIN_000910900
N
0.766
zic2b
Tetraodon nigroviridis
ENSTNIG00000014979
I
0.766
SMAR005380
Strigamia maritima
SMAR005380
I
0.766
ENSAMXG00000010941
Astyanax mexicanus
ENSAMXG00000010941
I
0.766
SMAR010285
Strigamia maritima
SMAR010285
N
0.765
zic1.S
Xenopus laevis
XB-GENE-864815
I
0.765
OFLC_0000964601
Onchocerca flexuosa
OFLC_0000964601
N
0.765
ENSTGUG00000008837
Taeniopygia guttata
ENSTGUG00000008837
I
0.765
ACEP13417
Atta cephalotes
ACEP13417
N
0.765
WUBG_07674
Wuchereria bancrofti
WUBG_07674
N
0.765
L889_g1190
Steinernema feltiae
L889_g1190
N
0.765
nDi.2.2.2.g11925
Dirofilaria immitis
nDi.2.2.2.g11925
N
0.765
BTMF_0001537801
Brugia timori
BTMF_0001537801
N
0.765
ANCDUO_07508
Ancylostoma duodenale
ANCDUO_07508
N
0.764
SPU_028583
Strongylocentrotus purpuratus
SPU_028583
I
0.764
ENSTNIG00000017808
Tetraodon nigroviridis
ENSTNIG00000017808
N
0.764
ANCCAN_13802
Ancylostoma caninum
ANCCAN_13802
N
0.764
SPU_030070
Strongylocentrotus purpuratus
SPU_030070
I
0.764
TELCIR_23243
Teladorsagia circumcincta
TELCIR_23243
N
0.764
ZIC3
Bos taurus
ENSBTAG00000021413
I
0.763
ZIC3
Canis familiaris
ENSCAFG00000018979
I
0.763
ENSPANG00000011357
Papio anubis
ENSPANG00000011357
I
0.763
Zic3
Rattus norvegicus
ENSRNOG00000000861
I
0.763
ENSTSYG00000003356
Tarsius syrichta
ENSTSYG00000003356
I
0.763
ZIC3
Sus scrofa
ENSSSCG00000012705
I
0.763
ENSSTOG00000024153
Ictidomys tridecemlineatus
ENSSTOG00000024153
I
0.763
ENSAMEG00000002684
Ailuropoda melanoleuca
ENSAMEG00000002684
I
0.763
ZIC3
Pteropus vampyrus
ENSPVAG00000011652
I
0.763
ENSPFOG00000012982
Poecilia formosa
ENSPFOG00000012982
I
0.763
ENSPPYG00000020775
Pongo abelii
ENSPPYG00000020775
I
0.763
ENSXMAG00000013404
Xiphophorus maculatus
ENSXMAG00000013404
I
0.763
ENSAPLG00000003027
Anas platyrhynchos
ENSAPLG00000003027
I
0.763
ZIC3
Otolemur garnettii
ENSOGAG00000011700
I
0.763
ENSDORG00000014318
Dipodomys ordii
ENSDORG00000014318
I
0.763
ZIC3
Equus caballus
ENSECAG00000013318
I
0.763
ENSMPUG00000001786
Mustela putorius furo
ENSMPUG00000001786
I
0.763
ZIC3
Dasypus novemcinctus
ENSDNOG00000006192
I
0.763
zic3
Oryzias latipes
ENSORLG00000001654
I
0.763
ZIC3
Echinops telfairi
ENSETEG00000018846
I
0.763
ZIC3
Myotis lucifugus
ENSMLUG00000011691
I
0.763
ZIC3
Loxodonta africana
ENSLAFG00000007048
I
0.763
ZIC3
Homo sapiens
ENSG00000156925
D
0.763
ZIC3
Felis catus
ENSFCAG00000025684
I
0.763
ENSMICG00000010339
Microcebus murinus
ENSMICG00000010339
I
0.763
Zic3
Mus musculus
ENSMUSG00000067860
D
0.763
Myotis_brandtii_ZIC3_10005513
Myotis brandtii
Myotis_brandtii_ZIC3_10005513
I
0.763
ZIC3
Gorilla gorilla
ENSGGOG00000011914
I
0.763
ENSCPOG00000002374
Cavia porcellus
ENSCPOG00000002374
I
0.763
ENSONIG00000002716
Oreochromis niloticus
ENSONIG00000002716
I
0.763
ZIC3
Callithrix jacchus
ENSCJAG00000013792
I
0.763
ZIC3
Oryctolagus cuniculus
ENSOCUG00000009358
I
0.763
ENSCSAG00000007453
Chlorocebus sabaeus
ENSCSAG00000007453
I
0.763
ENSP00000287538
Macaca fascicularis
ENSP00000287538
I
0.763
ENSP00000287538-D1
Bos grunniens
ENSP00000287538-D1
I
0.763
ENSOARG00000010774
Ovis aries
ENSOARG00000010774
I
0.763
ENSNLEG00000003005
Nomascus leucogenys
ENSNLEG00000003005
I
0.763
zic4
Xenopus tropicalis
XB-GENE-1033015
I
0.762
zic4.L
Xenopus laevis
XB-GENE-1033019
I
0.762
Ogr15027
Ophisaurus gracilis
Ogr15027
I
0.762
Pvit_01478
Pogona vitticeps
Pvit_01478
I
0.762
LotgiG193238
Lottia gigantea
LotgiG193238
I
0.762
ENSXMAG00000009164
Xiphophorus maculatus
ENSXMAG00000009164
I
0.762
Alligator_sinensis_CCG012205.1
Alligator sinensis
Alligator_sinensis_CCG012205.1
I
0.762
zic2b
Oryzias latipes
ENSORLG00000011117
I
0.762
ENSONIG00000006788
Oreochromis niloticus
ENSONIG00000006788
I
0.762
ZIC4
Otolemur garnettii
ENSOGAG00000007463
I
0.762
ENSFALG00000007091
Ficedula albicollis
ENSFALG00000007091
I
0.762
ENSMEUG00000009632
Macropus eugenii
ENSMEUG00000009632
I
0.762
ENSSHAG00000015091
Sarcophilus harrisii
ENSSHAG00000015091
I
0.762
zic3
Danio rerio
ENSDARG00000071497
I
0.761
ENSPSIG00000004881
Pelodiscus sinensis
ENSPSIG00000004881
I
0.760
ENSGMOG00000019585
Gadus morhua
ENSGMOG00000019585
I
0.760
ENSMODG00000021250
Monodelphis domestica
ENSMODG00000021250
I
0.760
SSLN_0000489501
Schistocephalus solidus
SSLN_0000489501
N
0.760
ZIC1
Macaca mulatta
ENSMMUG00000004742
I
0.759
ENSGMOG00000001788
Gadus morhua
ENSGMOG00000001788
I
0.759
ZIC1
Gorilla gorilla
ENSGGOG00000001101
I
0.759
ENSLOCG00000007717
Lepisosteus oculatus
ENSLOCG00000007717
I
0.759
ZIC1
Loxodonta africana
ENSLAFG00000030632
I
0.759
Pvit_01479
Pogona vitticeps
Pvit_01479
I
0.759
ZIC1
Microcebus murinus
ENSMICG00000014401
I
0.759
Ogr15030
Ophisaurus gracilis
Ogr15030
I
0.759
ENSLOCG00000007706
Lepisosteus oculatus
ENSLOCG00000007706
I
0.759
ZIC1
Felis catus
ENSFCAG00000007061
I
0.759
ZIC1
Bos taurus
ENSBTAG00000014751
I
0.759
ZIC1
Callithrix jacchus
ENSCJAG00000001524
I
0.759
ENSAPLG00000002960
Anas platyrhynchos
ENSAPLG00000002960
I
0.759
ENSAMXG00000010931
Astyanax mexicanus
ENSAMXG00000010931
I
0.759
ZIC1
Anolis carolinensis
ENSACAG00000006947
I
0.759
ENSAMEG00000002149
Ailuropoda melanoleuca
ENSAMEG00000002149
I
0.759
ENSCSAG00000011409
Chlorocebus sabaeus
ENSCSAG00000011409
I
0.759
zic1
Danio rerio
ENSDARG00000015567
I
0.759
zic1
Gasterosteus aculeatus
ENSGACG00000003678
I
0.759
XP_002937379
Xenopus tropicalis
XP_002937379
I
0.759
ENSMPUG00000011764
Mustela putorius furo
ENSMPUG00000011764
I
0.759
ENSFALG00000007094
Ficedula albicollis
ENSFALG00000007094
I
0.759
ZIC1
Dasypus novemcinctus
ENSDNOG00000047101
I
0.759
ENSGALG00000006811
Gallus gallus
ENSGALG00000006811
I
0.759
Zic1
Mus musculus
ENSMUSG00000032368
D
0.759
zic1
Takifugu rubripes
ENSTRUG00000017760
I
0.759
ENSPANG00000005804
Papio anubis
ENSPANG00000005804
I
0.759
ENSSTOG00000000952
Ictidomys tridecemlineatus
ENSSTOG00000000952
I
0.759
ZIC1
Taeniopygia guttata
ENSTGUG00000008838
I
0.759
PHUM303860
Pediculus humanus
PHUM303860
I
0.759
ENSPSIG00000005002
Pelodiscus sinensis
ENSPSIG00000005002
I
0.759
ZIC1
Sus scrofa
ENSSSCG00000011692
I
0.759
Zic1
Rattus norvegicus
ENSRNOG00000014644
I
0.759
ZIC1
Pan troglodytes
ENSPTRG00000015501
I
0.759
L798_08424
Zootermopsis nevadensis
L798_08424
I
0.759
ZIC1
Tursiops truncatus
ENSTTRG00000014350
I
0.759
Aan_R013349
Calypte anna
Aan_R013349
I
0.759
Gfo_R005436
Geospiza fortis
Gfo_R005436
I
0.759
ENSNLEG00000002407
Nomascus leucogenys
ENSNLEG00000002407
I
0.759
ENSP00000282928
Macaca fascicularis
ENSP00000282928
I
0.759
ENSP00000282928-D1
Bos grunniens
ENSP00000282928-D1
I
0.759
Cmyd_10020767
Chelonia mydas
Cmyd_10020767
I
0.759
Alligator_sinensis_CCG012204.1
Alligator sinensis
Alligator_sinensis_CCG012204.1
I
0.759
Myotis_brandtii_ZIC1_10009541
Myotis brandtii
Myotis_brandtii_ZIC1_10009541
I
0.759
ZIC1
Otolemur garnettii
ENSOGAG00000007465
I
0.759
ENSOARG00000005434
Ovis aries
ENSOARG00000005434
I
0.759
zic2b
Gasterosteus aculeatus
ENSGACG00000001901
I
0.758
ENSLACG00000008525
Latimeria chalumnae
ENSLACG00000008525
I
0.758
Zic4
Rattus norvegicus
ENSRNOG00000014871
I
0.757
Zic4
Mus musculus
ENSMUSG00000036972
I
0.757
zic1
Tetraodon nigroviridis
ENSTNIG00000012758
I
0.757
zic4
Takifugu rubripes
ENSTRUG00000017765
I
0.756
zic4
Gasterosteus aculeatus
ENSGACG00000003685
I
0.756
ENSONIG00000005878
Oreochromis niloticus
ENSONIG00000005878
I
0.756
ENSGMOG00000001798
Gadus morhua
ENSGMOG00000001798
I
0.756
zic4
Oryzias latipes
ENSORLG00000010055
I
0.756
zic4
Tetraodon nigroviridis
ENSTNIG00000012759
I
0.756
zic4
Danio rerio
ENSDARG00000031307
I
0.756
ENSPFOG00000014007
Poecilia formosa
ENSPFOG00000014007
I
0.756
ENSXMAG00000009162
Xiphophorus maculatus
ENSXMAG00000009162
I
0.756