CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF454
(
Tupaia belangeri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTBEG00000000346
T111005_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF454
M04571_2.00
Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_1
0.792
0.953
ZNF454
M04572_2.00
Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_2
0.792
0.953
ZNF454
M08346_2.00
Homo sapiens
KVVRNCHNYMRGGGCCNDGDGCCWTTB
VAAWGGCHCHNGGCCCYKRNDGNYBBM
ChIP-seq
Schmitges et al.(2016)
Q8N9F8_4-12.RCADE
0.792
0.953
ZNF454
M08256_2.00
Homo sapiens
GWGCYTT
AARGCWC
ChIP-seq
Najafabadi et al.(2015b)
ZNF454
0.792
0.953
ZNF454
M07651_2.00
Homo sapiens
CRKVVRHCCVYCRGGVCCBVGAGCCNKYB
VRMNGGCTCBVGGBCCYGRBRGDYBBMYG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF454.MEME.OriginalMapping
0.792
0.953
ZNF454
M04573_2.00
Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_1
0.792
0.953
ZNF454
M04574_2.00
Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_2
0.792
0.953
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000000293
C2H2 ZF
181
203
FECNECGKVFLKSATLSKHQKTH
ENSTBEP00000000293
C2H2 ZF
220
242
YECRECGKAFHQSTHLIHHQRVH
ENSTBEP00000000293
C2H2 ZF
248
270
YECKDCGKAFSVSSSLTYHQKIH
ENSTBEP00000000293
C2H2 ZF
276
298
FECNLCGKAFIRNIHLAHHHRIH
ENSTBEP00000000293
C2H2 ZF
304
326
FKCNICEKAFVCRAHLTKHQNIH
ENSTBEP00000000293
C2H2 ZF
332
354
YKCSECGKAFSQSTSFLQHQRIH
ENSTBEP00000000293
C2H2 ZF
360
382
FECNECGKAFRVNSSLTEHQRIH
ENSTBEP00000000293
C2H2 ZF
388
410
YQCNECGKAFRDNSSFARHRKIH
ENSTBEP00000000293
C2H2 ZF
416
438
YRCGLCEKAFRDQSALAQHQRIH
ENSTBEP00000000293
C2H2 ZF
444
466
YTCNTCEKAFSDHSALTQHKRIH
ENSTBEP00000000293
C2H2 ZF
472
494
YKCKICGKAFIRSTHLTQHQRVH
ENSTBEP00000000293
C2H2 ZF
500
522
YKCNKCGKAFNQTANLIQHQRHH
Links
Other
C2H2 ZF
family TFs
Other
Tupaia belangeri
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy