klf8 (Tetraodon nigroviridis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTNIG00000004690 T111970_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Klf8
M00779_2.00
Mus musculus
NNNMCRCCYN

NRGGYGKNNN
PBM
Weirauch et al.(2013)
pTH3086
0.785 0.884
KLF8
M08867_2.00
Homo sapiens
CACMCMCKG

CMGKGKGTG
Misc
Kulakovskiy et al.(2013)
KLF8_HUMAN.H11MO.0.C
0.785 0.884
Klf8
M09000_2.00
Mus musculus
CACMCMCKG

CMGKGKGTG
Misc
Kulakovskiy et al.(2013)
KLF8_MOUSE.H11MO.0.C
0.785 0.884
KLF8
M10147_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF8_Q5_01
0.785 0.884
KLF8
M10148_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF8_Q5
0.785 0.884
CG42741
M06169_2.00
Drosophila melanogaster
RCCACRCCCWHY

RDWGGGYGTGGY
B1H
Zhu et al.(2011)
CG9895_SANGER_10_FBgn0034810
0.781 0.841
CG42741
M06170_2.00
Drosophila melanogaster
VRCCACRCCCH

DGGGYGTGGYB
B1H
Zhu et al.(2011)
CG9895_SOLEXA_5_FBgn0034810
0.781 0.841
klf-3
M00617_2.00
Caenorhabditis elegans
NHMCGCCCH

DGGGCGKDN
PBM
Narasimhan et al.(2015)
pTH9072
0.764 0.710
KLF1
M00226_2.00
Homo sapiens
CMCGCCCM

KGGGCGKG
PBM
Barrera et al.(2016)
KLF1_REF
0.758 0.768
KLF4
M04463_2.00
Homo sapiens
NVCCACRCCCH

DGGGYGTGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_HT-SELEX
0.758 0.768
KLF4
M08091_2.00
Homo sapiens
MCACACCCWNN

NNWGGGTGTGK
ChIP-seq
Mathelier et al.(2014)
MA0039.3
0.758 0.768
Klf4
M08021_2.00
Mus musculus
VRCCMCRCCCH

DGGGYGKGGYB
ChIP-seq
Chen et al.(2011)
SRP000217_Klf4
0.758 0.768
KLF4
M08243_2.00
Homo sapiens
RCCMCRCCCH

DGGGYGKGGY
ChIP-seq
Najafabadi et al.(2015b)
KLF14
0.758 0.768
KLF1
M08293_2.00
Homo sapiens
NVNNNRCCMCRCCCH

DGGGYGKGGYNNNBN
ChIP-seq
Schmitges et al.(2016)
Q13351.MEME
0.758 0.768
KLF1
M08871_2.00
Homo sapiens
SVNDGCCMCRCCCH

DGGGYGKGGCHNBS
Misc
Kulakovskiy et al.(2013)
KLF1_HUMAN.H11MO.0.A
0.758 0.768
KLF4
M08894_2.00
Homo sapiens
RCCMCRCCCH

DGGGYGKGGY
Misc
Kulakovskiy et al.(2013)
KLF4_HUMAN.H11MO.0.A
0.758 0.768
Klf4
M08964_2.00
Mus musculus
GCCMCRCCCWBYBBN

NVVRVWGGGYGKGGC
Misc
Kulakovskiy et al.(2013)
KLF4_MOUSE.H11MO.0.A
0.758 0.768
KLF1
M10163_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5_01
0.758 0.768
KLF1
M10164_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5
0.758 0.768
KLF4
M10217_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_02
0.758 0.768
KLF4
M10218_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3_01
0.758 0.768
KLF4
M10219_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3
0.758 0.768
KLF4
M10220_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q4
0.758 0.768
KLF4
M04464_2.00
Homo sapiens
NVCCMCRCCCN

NGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_Methyl-HT-SELEX
0.758 0.768
KLF1
M00224_2.00
Homo sapiens
YMCGCCCH

DGGGCGKR
PBM
Barrera et al.(2016)
KLF1_H299Y
0.758 0.754
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000001329 C2H2 ZF 222 246
ENSTNIP00000001329 C2H2 ZF 252 276
ENSTNIP00000001329 C2H2 ZF 282 304
ENSTNIP00000002631 C2H2 ZF 231 255
ENSTNIP00000002631 C2H2 ZF 261 285
ENSTNIP00000002631 C2H2 ZF 291 313
ENSTNIP00000007343 C2H2 ZF 213 237
ENSTNIP00000007343 C2H2 ZF 243 267
ENSTNIP00000007343 C2H2 ZF 273 295

Links

Other C2H2 ZF family TFs
Other Tetraodon nigroviridis TFs

203 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000015241 Ailuropoda melanoleuca ENSAMEG00000015241 I 0.000
ENSAPLG00000005397 Anas platyrhynchos ENSAPLG00000005397 I 0.000
ENSBTAP00000012902-D1 Bos grunniens ENSBTAP00000012902-D1 I 0.000
GTF2I Bos taurus ENSBTAG00000009780 I 0.000
GTF2I Callithrix jacchus ENSCJAG00000016182 I 0.000
GTF2I Canis familiaris ENSCAFG00000011514 I 0.000
GTF2I Cavia porcellus ENSCPOG00000004071 I 0.000
Cmyd_10014807 Chelonia mydas Cmyd_10014807 I 0.000
ENSCSAG00000018227 Chlorocebus sabaeus ENSCSAG00000018227 I 0.000
ENSDNOG00000000823 Dasypus novemcinctus ENSDNOG00000000823 I 0.000
GTF2I Equus caballus ENSECAG00000020289 I 0.000
GTF2I Felis catus ENSFCAG00000002617 I 0.000
GTF2I Homo sapiens ENSG00000263001 D 0.000
GTF2I Loxodonta africana ENSLAFG00000003646 I 0.000
ENSP00000322542 Macaca fascicularis ENSP00000322542 I 0.000
GTF2I Macaca mulatta ENSMMUG00000006823 I 0.000
ENSMEUG00000012789 Macropus eugenii ENSMEUG00000012789 N 0.000
GTF2I Monodelphis domestica ENSMODG00000007022 I 0.000
ENSMPUG00000016156 Mustela putorius furo ENSMPUG00000016156 I 0.000
Gtf2i Mus musculus ENSMUSG00000060261 I 0.000
Myotis_brandtii_GTF2I_10014287 Myotis brandtii Myotis_brandtii_GTF2I_10014287 I 0.000
GTF2I Myotis lucifugus ENSMLUG00000002844 I 0.000
GTF2I Ornithorhynchus anatinus ENSOANG00000012919 I 0.000
GTF2I Oryctolagus cuniculus ENSOCUG00000002063 I 0.000
GTF2I Otolemur garnettii ENSOGAG00000029837 I 0.000
ENSOARG00000011276 Ovis aries ENSOARG00000011276 I 0.000
GTF2I Pan troglodytes ENSPTRG00000019293 I 0.000
ENSPANG00000010876 Papio anubis ENSPANG00000010876 I 0.000
ENSPSIG00000011811 Pelodiscus sinensis ENSPSIG00000011811 I 0.000
ENSPPYG00000017484 Pongo abelii ENSPPYG00000017484 I 0.000
GTF2I Pteropus vampyrus ENSPVAG00000005365 I 0.000
Gtf2i Rattus norvegicus ENSRNOG00000001479 I 0.000
GTF2I Sus scrofa ENSSSCG00000007721 I 0.000
GTF2I Vicugna pacos ENSVPAG00000008515 I 0.000