si:ch211-117k10.3 (Tetraodon nigroviridis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTNIG00000007382 T112010_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KLF15
M04511_2.00 		Homo sapiens
VHCMCVCCCMYN
NRKGGGBGKGDB		 SELEX
Yin et al.(2017)
KLF15_eDBD_HT-SELEX 		0.776 0.826
KLF15
M04513_2.00 		Homo sapiens
VMCMCDCCCMCH
DGKGGGHGKGKB		 SELEX
Yin et al.(2017)
KLF15_FL_HT-SELEX 		0.776 0.826
KLF15
M08323_2.00 		Homo sapiens
SSCYNBCYCCDCCYC
GRGGHGGRGVNRGSS		 ChIP-seq
Schmitges et al.(2016)
Q9UIH9.MEME 		0.776 0.826
KLF15
M08907_2.00 		Homo sapiens
CCNYYCCYNBCYCCKCCYY
RRGGMGGRGVNRGGRRNGG		 Misc
Kulakovskiy et al.(2013)
KLF15_HUMAN.H11MO.0.A 		0.776 0.826
Klf15
M08987_2.00 		Mus musculus
CCNYYCCYNBCYCCKCCYY
RRGGMGGRGVNRGGRRNGG		 Misc
Kulakovskiy et al.(2013)
KLF15_MOUSE.H11MO.0.A 		0.776 0.826
KLF15
M10241_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$KLF15_Q2 		0.776 0.826
KLF15
M04512_2.00 		Homo sapiens
RCCMCGCCCMCH
DGKGGGCGKGGY		 SELEX
Yin et al.(2017)
KLF15_eDBD_Methyl-HT-SELEX 		0.776 0.826
KLF15
M04514_2.00 		Homo sapiens
GCCMCGCCCMCN
NGKGGGCGKGGC		 SELEX
Yin et al.(2017)
KLF15_FL_Methyl-HT-SELEX 		0.776 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000010187 C2H2 ZF 227 251
ENSTNIP00000010187 C2H2 ZF 257 282
ENSTNIP00000010187 C2H2 ZF 288 310
ENSTNIP00000010188 C2H2 ZF 202 226
ENSTNIP00000010188 C2H2 ZF 232 257
ENSTNIP00000010188 C2H2 ZF 263 285

Links

Other C2H2 ZF family TFs
Other Tetraodon nigroviridis TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
si:ch211-117k10.3 Oryzias latipes ENSORLG00000012237 I 0.827
si:ch211-117k10.3 Takifugu rubripes ENSTRUG00000000076 I 0.827
ENSPFOG00000002472 Poecilia formosa ENSPFOG00000002472 I 0.819
ENSXMAG00000013094 Xiphophorus maculatus ENSXMAG00000013094 I 0.819
ENSGMOG00000003751 Gadus morhua ENSGMOG00000003751 I 0.800
si:ch211-117k10.3 Danio rerio ENSDARG00000090914 I 0.799
ENSAMXG00000003461 Astyanax mexicanus ENSAMXG00000003461 I 0.799
KLF15 Takifugu rubripes ENSTRUG00000006529 I 0.792
Pvit_06090 Pogona vitticeps Pvit_06090 I 0.786
Cmyd_10010595 Chelonia mydas Cmyd_10010595 I 0.786
Ogr18174 Ophisaurus gracilis Ogr18174 I 0.786
ENSLACG00000009512 Latimeria chalumnae ENSLACG00000009512 I 0.783
ENSONIG00000003215 Oreochromis niloticus ENSONIG00000003215 I 0.780
ENSPFOG00000012815 Poecilia formosa ENSPFOG00000012815 I 0.780
ENSONIG00000009164 Oreochromis niloticus ENSONIG00000009164 I 0.780
Aan_R004458 Calypte anna Aan_R004458 I 0.780
Cmyd_10013831 Chelonia mydas Cmyd_10013831 I 0.780
Gfo_R014652 Geospiza fortis Gfo_R014652 I 0.780
Pvit_11468 Pogona vitticeps Pvit_11468 I 0.780
Tal_R002960 Tyto alba Tal_R002960 I 0.780
Brh_R002160 Buceros rhinoceros Brh_R002160 I 0.780
Alligator_sinensis_CCG019865.1 Alligator sinensis Alligator_sinensis_CCG019865.1 I 0.780
ENSXMAG00000007908 Xiphophorus maculatus ENSXMAG00000007908 I 0.780
KLF15 Meleagris gallopavo ENSMGAG00000007616 I 0.780
Afo_R011755 Aptenodytes forsteri Afo_R011755 I 0.780
klf15 Takifugu rubripes ENSTRUG00000014976 I 0.780
klf15 Oryzias latipes ENSORLG00000001165 I 0.780
ENSGMOG00000000921 Gadus morhua ENSGMOG00000000921 I 0.780
ENSGALG00000006245 Gallus gallus ENSGALG00000006245 I 0.780
klf15 Gasterosteus aculeatus ENSGACG00000003717 I 0.780
ENSAPLG00000012971 Anas platyrhynchos ENSAPLG00000012971 I 0.780
ENSLACG00000013240 Latimeria chalumnae ENSLACG00000013240 I 0.780
ENSFALG00000012601 Ficedula albicollis ENSFALG00000012601 I 0.780
ENSLOCG00000011807 Lepisosteus oculatus ENSLOCG00000011807 I 0.780
klf15 Danio rerio ENSDARG00000091127 I 0.776
ENSCSAG00000008037 Chlorocebus sabaeus ENSCSAG00000008037 I 0.776
KLF15 Cavia porcellus ENSCPOG00000005315 I 0.776
KLF15 Dasypus novemcinctus ENSDNOG00000036157 I 0.776
ENSDORG00000016283 Dipodomys ordii ENSDORG00000016283 I 0.776
KLF15 Tursiops truncatus ENSTTRG00000008498 I 0.776
ENSXMAG00000001323 Xiphophorus maculatus ENSXMAG00000001323 I 0.776
ENSNLEG00000001047 Nomascus leucogenys ENSNLEG00000001047 I 0.776
KLF15 Callithrix jacchus ENSCJAG00000006941 I 0.776
KLF15 Canis familiaris ENSCAFG00000003807 I 0.776
ENSAMEG00000006403 Ailuropoda melanoleuca ENSAMEG00000006403 I 0.776
klf15 Xenopus tropicalis XB-GENE-854149 I 0.776
klf15.S Xenopus laevis XB-GENE-854150 I 0.776
ENSAMXG00000012874 Astyanax mexicanus ENSAMXG00000012874 I 0.776
ENSAMXG00000016240 Astyanax mexicanus ENSAMXG00000016240 I 0.776
ENSP00000296233 Macaca fascicularis ENSP00000296233 I 0.776
Ogr01993 Ophisaurus gracilis Ogr01993 I 0.776
ENSLOCG00000013716 Lepisosteus oculatus ENSLOCG00000013716 I 0.776
KLF15 Equus caballus ENSECAG00000021092 I 0.776
ENSMPUG00000017390 Mustela putorius furo ENSMPUG00000017390 I 0.776
KLF15 Homo sapiens ENSG00000163884 D 0.776
ENSPANG00000026096 Papio anubis ENSPANG00000026096 I 0.776
KLF15 Ochotona princeps ENSOPRG00000005237 I 0.776
Klf15 Mus musculus ENSMUSG00000030087 D 0.776
KLF15 Otolemur garnettii ENSOGAG00000000703 I 0.776
KLF15 Loxodonta africana ENSLAFG00000011970 I 0.776
ENSPFOG00000003698 Poecilia formosa ENSPFOG00000003698 I 0.776
KLF15 Procavia capensis ENSPCAG00000006301 I 0.776
KLF15 Macaca mulatta ENSMMUG00000003721 I 0.776
ENSSHAG00000007635 Sarcophilus harrisii ENSSHAG00000007635 I 0.776
KLF15 Gasterosteus aculeatus ENSGACG00000011317 I 0.776
KLF15 Myotis lucifugus ENSMLUG00000010178 I 0.776
KLF15 Ornithorhynchus anatinus ENSOANG00000014825 I 0.776
Klf15 Rattus norvegicus ENSRNOG00000017808 I 0.776
KLF15 Pteropus vampyrus ENSPVAG00000004109 I 0.776
ENSPPYG00000013455 Pongo abelii ENSPPYG00000013455 I 0.776
klf15.2 Xenopus tropicalis XB-GENE-1018580 I 0.773
ENSACAG00000012356 Anolis carolinensis ENSACAG00000012356 I 0.770
KLF15 Gorilla gorilla ENSGGOG00000009916 I 0.767
gw.442.76.1 Branchiostoma floridae gw.442.76.1 I 0.767
Tal_R006156 Tyto alba Tal_R006156 I 0.767
gw.37.333.1 Branchiostoma floridae gw.37.333.1 I 0.767
Sakowv30044439m.g Saccoglossus kowalevskii Sakowv30044439m.g I 0.763
KLF15 Bos taurus ENSBTAG00000008313 I 0.760
SPU_015772 Strongylocentrotus purpuratus SPU_015772 I 0.759
XP_002161066.1 Hydra magnipapillata XP_002161066.1 I 0.757
SMU15001129 Schmidtea mediterranea SMU15001129 I 0.756