CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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si:ch211-198a12.6
(
Tetraodon nigroviridis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTNIG00000008666
T112035_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000011514
C2H2 ZF
24
46
YICVHCGESFAVEASLKQHMKIH
ENSTNIP00000011514
C2H2 ZF
82
104
HRCSECGKSFAAAITLREHMKMH
ENSTNIP00000011514
C2H2 ZF
110
132
YKCTQCRKSFVRRRHLKKHQEVH
ENSTNIP00000011514
C2H2 ZF
138
160
YTCGQCGKGFATTSNLKQHQKSH
ENSTNIP00000011514
C2H2 ZF
170
192
HLCAQCGKCFAAAATLREHQRIH
ENSTNIP00000011514
C2H2 ZF
198
220
YKCNMCRKSFVRKRHLKKHQQVH
ENSTNIP00000011514
C2H2 ZF
226
248
YTCRHCNKGFNHSSSLSRHHKTH
ENSTNIP00000011514
C2H2 ZF
281
303
YMCHHCDKGFNHSSSLSRHQRVH
ENSTNIP00000011514
C2H2 ZF
311
333
YPCAHCGKRFNHSSSLARHQRVH
ENSTNIP00000011514
C2H2 ZF
368
390
YRCSQCGKGFNHSSSLSRHHRIH
Links
Other
C2H2 ZF
family TFs
Other
Tetraodon nigroviridis
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
si:ch211-198a12.6
Oryzias latipes
ENSORLG00000007397
N
0.804
si:ch211-198a12.6
Danio rerio
ENSDARG00000074624
N
0.757