CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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zbtb20
(
Tetraodon nigroviridis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTNIG00000010038
T112053_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB20
M04599_2.00
Homo sapiens
NVYATACRTYVN
NBRAYGTATRBN
SELEX
Yin et al.(2017)
ZBTB20_eDBD_HT-SELEX
0.771
0.965
ZBTB20
M04600_2.00
Homo sapiens
NVYATACRTTNN
NNAAYGTATRBN
SELEX
Yin et al.(2017)
ZBTB20_eDBD_Methyl-HT-SELEX
0.771
0.965
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000012934
C2H2 ZF
472
494
YECTLCSKTFTAKQNYVKHMFVH
ENSTNIP00000012934
C2H2 ZF
500
522
HQCSICWRSFSLKDYLIKHMVTH
ENSTNIP00000012934
C2H2 ZF
528
550
YQCSICNKRFTQKSSLNVHMRLH
ENSTNIP00000012934
C2H2 ZF
556
578
YECYICKKKFSHKTLLERHMALH
ENSTNIP00000012934
C2H2 ZF
610
632
YVCSVCPAKFDQMEHFNDHMRMH
Links
Other
C2H2 ZF
family TFs
Other
Tetraodon nigroviridis
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy