CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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zbtb17
(
Tetraodon nigroviridis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTNIG00000010902
T112065_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zbtb17
M08967_2.00
Mus musculus
SBKCCCCKCCCCCNCBBBS
SVVVGNGGGGGMGGGGMVS
Misc
Kulakovskiy et al.(2013)
ZBT17_MOUSE.H11MO.0.A
0.769
0.858
ZBTB17
M08878_2.00
Homo sapiens
YHKYYCHKCCYYCWBYYNN
NNRRVWGRRGGMDGRRMDR
Misc
Kulakovskiy et al.(2013)
ZBT17_HUMAN.H11MO.0.A
0.768
0.854
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000013832
C2H2 ZF
310
332
HKCQNCGKKFTHTGNFKRHMRIH
ENSTNIP00000013832
C2H2 ZF
347
368
SCRDCNKAFSDPAACKAHEKTH
ENSTNIP00000013832
C2H2 ZF
374
396
YTCSTCGKSYRQISLLNLHRKRH
ENSTNIP00000013832
C2H2 ZF
402
424
YTCRLCGKTFTTSGNLKRHQLVH
ENSTNIP00000013832
C2H2 ZF
430
452
YQCDYCDKAFSDPTAKMRHLETH
ENSTNIP00000013832
C2H2 ZF
459
480
KCPHCDKRFSQMGNLKAHLKIH
ENSTNIP00000013832
C2H2 ZF
486
508
LKCKECGKQFTSSGNLKRHVRVH
ENSTNIP00000013832
C2H2 ZF
514
536
YICVHCKRAFSDPGALQRHERIH
ENSTNIP00000013832
C2H2 ZF
542
564
CVCAICGKAFTQASSLIAHVRQH
ENSTNIP00000013832
C2H2 ZF
570
592
YVCDRCGKRFVQSSQLANHIRHH
ENSTNIP00000013832
C2H2 ZF
598
620
HKCHMCSKAFVNFGDLSKHIIIH
ENSTNIP00000013832
C2H2 ZF
626
650
FLCDKCGRGFNRVDNLRSHVKTVHH
Links
Other
C2H2 ZF
family TFs
Other
Tetraodon nigroviridis
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy