CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
si:ch211-236k19.4
(
Tetraodon nigroviridis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTNIG00000011438
T112070_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB26
M04547_2.00
Homo sapiens
NYDTTCTRGADH
DHTCYAGAAHRN
SELEX
Yin et al.(2017)
ZBTB26_FL_HT-SELEX
0.814
0.967
ZBTB26
M08340_2.00
Homo sapiens
CRCGCRCRCDCRCRMRCRCRC
GYGYGYKYGYGHGYGYGCGYG
ChIP-seq
Schmitges et al.(2016)
Q9HCK0.MEME
0.814
0.967
ZBTB26
M04548_2.00
Homo sapiens
NBDTTCTRGADN
NHTCYAGAAHVN
SELEX
Yin et al.(2017)
ZBTB26_FL_Methyl-HT-SELEX
0.814
0.967
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000014384
C2H2 ZF
284
306
HQCPKCTRVFRQLENYANHLKMH
ENSTNIP00000014384
C2H2 ZF
309
331
FMCLLCGKTFTQKGNLHRHMRVH
ENSTNIP00000014384
C2H2 ZF
337
359
FQCKICGKTFTQKCSLQDHLNLH
ENSTNIP00000014384
C2H2 ZF
365
388
HRCNYCDMVFAHKPVLRKHLKQIH
Links
Other
C2H2 ZF
family TFs
Other
Tetraodon nigroviridis
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy