CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
znf513a
(
Tetraodon nigroviridis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTNIG00000016340
T112124_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000019435
C2H2 ZF
151
173
HSCHLCGFSSRYANHVKRHMKTH
ENSTNIP00000019435
C2H2 ZF
179
201
YHCPLCTYASAQLVNLQRHLRIH
ENSTNIP00000019435
C2H2 ZF
207
229
YKCDSCTFACSSLGNLKRHQRMH
ENSTNIP00000019435
C2H2 ZF
347
369
YTCSACPFLTHYPNHLARHMKTH
ENSTNIP00000019435
C2H2 ZF
375
397
YKCPQCDYASAHFDNLKRHHRVH
ENSTNIP00000019435
C2H2 ZF
403
425
YKCHLCDYACGNLANLKRHQRVH
ENSTNIP00000019435
C2H2 ZF
431
453
FQCAVCSYSCNQSMNLKRHMLRH
ENSTNIP00000019435
C2H2 ZF
459
481
YKCRECGYTTGHWDNYKRHQKKH
Links
Other
C2H2 ZF
family TFs
Other
Tetraodon nigroviridis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
znf513a
Takifugu rubripes
ENSTRUG00000007237
N
0.826
ENSONIG00000015322
Oreochromis niloticus
ENSONIG00000015322
N
0.819
ENSXMAG00000004212
Xiphophorus maculatus
ENSXMAG00000004212
N
0.816
znf513a
Oryzias latipes
ENSORLG00000016316
N
0.816
ENSPFOG00000009465
Poecilia formosa
ENSPFOG00000009465
N
0.815
znf513a
Gasterosteus aculeatus
ENSGACG00000010769
N
0.811
znf513a
Danio rerio
ENSDARG00000019961
N
0.806
ENSAMXG00000019268
Astyanax mexicanus
ENSAMXG00000019268
N
0.803