CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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znf281a
(
Tetraodon nigroviridis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTNIG00000016430
T112125_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zfp281
M00139_2.00
Mus musculus
NHDCCCCCHH
DDGGGGGHDN
PBM
Badis et al.(2009)
Zfp281_0973
0.774
0.868
ZNF281
M04509_2.00
Homo sapiens
SCCCCTCCCCCM
KGGGGGAGGGGS
SELEX
Yin et al.(2017)
ZNF281_eDBD_HT-SELEX
0.774
0.868
ZNF281
M08321_2.00
Homo sapiens
BNCCCCTCCCCC
GGGGGAGGGGNV
ChIP-seq
Schmitges et al.(2016)
Q9Y2X9_1-4.RCADE
0.774
0.868
Zfp281
M08025_2.00
Mus musculus
CCCCWCCCCCMVCHB
VDGBKGGGGGWGGGG
ChIP-seq
Chen et al.(2011)
GSE11329_zfp281
0.774
0.868
ZNF281
M08906_2.00
Homo sapiens
BCCCCTCCCCCHNYN
NRNDGGGGGAGGGGV
Misc
Kulakovskiy et al.(2013)
ZN281_HUMAN.H11MO.0.A
0.774
0.868
Zfp281
M08999_2.00
Mus musculus
CCCCTCCCCCMMCBB
VVGKKGGGGGAGGGG
Misc
Kulakovskiy et al.(2013)
ZN281_MOUSE.H11MO.0.A
0.774
0.868
ZNF281
M10237_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP281_01
0.774
0.868
ZNF281
M04510_2.00
Homo sapiens
RCCCMTCCCCCR
YGGGGGAKGGGY
SELEX
Yin et al.(2017)
ZNF281_eDBD_Methyl-HT-SELEX
0.774
0.868
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000019528
C2H2 ZF
34
56
HMCEHCSASFRSSYHLRRHVLIH
ENSTNIP00000019528
C2H2 ZF
62
84
FRCSQCNMSFIQKYLLQRHEKIH
ENSTNIP00000019528
C2H2 ZF
90
112
FSCDQCNMRFIQKYHMERHKRTH
ENSTNIP00000019528
C2H2 ZF
118
139
YRCETCQQYFSRTDRLLKHKRT
Links
Other
C2H2 ZF
family TFs
Other
Tetraodon nigroviridis
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy