CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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bcl6ab
(
Takifugu rubripes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTRUG00000001788
T112214_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BCL6B
M02896_2.00
Homo sapiens
TGCTTTCTAGGAATTMM
KKAATTCCTAGAAAGCA
SELEX
Jolma et al.(2013)
BCL6B_1
0.811
0.861
BCL6B
M04499_2.00
Homo sapiens
NNGCTTTCKAGGAAHN
NDTTCCTMGAAAGCNN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_1
0.811
0.861
BCL6B
M04500_2.00
Homo sapiens
NDTTCCTCGATTRCVN
NBGYAATCGAGGAAHN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_2
0.811
0.861
BCL6B
M04501_2.00
Homo sapiens
NHGCTTTCTAGGAAHN
NDTTCCTAGAAAGCDN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_1
0.811
0.861
BCL6B
M04502_2.00
Homo sapiens
NWTTCCTAGATTACRN
NYGTAATCTAGGAAWN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_2
0.811
0.861
Bcl6b
M00128_2.00
Mus musculus
NYYYTYCYWNNN
NNNWRGRARRRN
PBM
Badis et al.(2009)
Bcl6b_0961
0.802
0.852
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000004125
C2H2 ZF
496
518
YKCDYCQATFRYKGNLASHKTVH
ENSTRUP00000004125
C2H2 ZF
524
546
YHCNICGAQFNRPANLKTHTRIH
ENSTRUP00000004125
C2H2 ZF
552
574
YKCETCGSRFVQVAHLRAHVLIH
ENSTRUP00000004125
C2H2 ZF
580
602
YPCEICGTHFRHLQTLKSHMRIH
ENSTRUP00000004125
C2H2 ZF
608
631
YHCEKCDLHFRHKSQLRLHLRQKH
ENSTRUP00000004126
C2H2 ZF
491
513
YKCDYCQATFRYKGNLASHKTVH
ENSTRUP00000004126
C2H2 ZF
519
541
YHCNICGAQFNRPANLKTHTRIH
ENSTRUP00000004126
C2H2 ZF
547
569
YKCETCGSRFVQVAHLRAHVLIH
ENSTRUP00000004126
C2H2 ZF
575
597
YPCEICGTHFRHLQTLKSHMRIH
ENSTRUP00000004126
C2H2 ZF
603
626
YHCEKCDLHFRHKSQLRLHLRQKH
Links
Other
C2H2 ZF
family TFs
Other
Takifugu rubripes
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
bcl6ab
Tetraodon nigroviridis
ENSTNIG00000007834
I
0.827
bcl6ab
Oryzias latipes
ENSORLG00000004563
I
0.815
ENSMEUG00000000375
Macropus eugenii
ENSMEUG00000000375
I
0.813
BCL6B
Monodelphis domestica
ENSMODG00000006161
I
0.813
BCL6B
Canis familiaris
ENSCAFG00000015968
I
0.813
ENSPANG00000024201
Papio anubis
ENSPANG00000024201
I
0.811
BCL6B
Procavia capensis
ENSPCAG00000013548
I
0.811
BCL6B
Cavia porcellus
ENSCPOG00000004066
I
0.811
ENSAMEG00000016319
Ailuropoda melanoleuca
ENSAMEG00000016319
I
0.811
ENSPPYG00000007891
Pongo abelii
ENSPPYG00000007891
I
0.811
BCL6B
Bos taurus
ENSBTAG00000020854
I
0.811
BCL6B
Sus scrofa
ENSSSCG00000017927
I
0.811
ENSSHAG00000000166
Sarcophilus harrisii
ENSSHAG00000000166
I
0.811
BCL6B
Tupaia belangeri
ENSTBEG00000005792
I
0.811
BCL6B
Pan troglodytes
ENSPTRG00000008656
I
0.811
ENSP00000293805-D1
Bos grunniens
ENSP00000293805-D1
I
0.811
ENSNLEG00000009340
Nomascus leucogenys
ENSNLEG00000009340
I
0.811
BCL6B
Gorilla gorilla
ENSGGOG00000009787
I
0.811
BCL6B
Loxodonta africana
ENSLAFG00000006642
I
0.811
BCL6B
Homo sapiens
ENSG00000161940
D
0.811
BCL6B
Equus caballus
ENSECAG00000023771
I
0.811
Bcl6b
Dipodomys ordii
ENSDORG00000005538
I
0.811
ENSCSAG00000012171
Chlorocebus sabaeus
ENSCSAG00000012171
I
0.811
ENSMLUG00000003564
Myotis lucifugus
ENSMLUG00000003564
I
0.811
ENSP00000293805
Macaca fascicularis
ENSP00000293805
I
0.811
ENSMPUG00000010670
Mustela putorius furo
ENSMPUG00000010670
I
0.811
ENSSTOG00000006365
Ictidomys tridecemlineatus
ENSSTOG00000006365
I
0.811
BCL6B
Macaca mulatta
ENSMMUG00000016268
I
0.811
Myotis_brandtii_BCL6B_10021005
Myotis brandtii
Myotis_brandtii_BCL6B_10021005
I
0.811
BCL6B
Otolemur garnettii
ENSOGAG00000027908
I
0.809
ENSOARG00000009610
Ovis aries
ENSOARG00000009610
I
0.809
BCL6B
Dasypus novemcinctus
ENSDNOG00000035586
I
0.807
BCL6B
Ochotona princeps
ENSOPRG00000006070
I
0.802
Bcl6b
Mus musculus
ENSMUSG00000000317
D
0.802
ENSPSIG00000013071
Pelodiscus sinensis
ENSPSIG00000013071
I
0.799
Bcl6b
Rattus norvegicus
ENSRNOG00000059956
I
0.799
BCL6B
Tursiops truncatus
ENSTTRG00000003982
I
0.796
Alligator_sinensis_CCG005035.1
Alligator sinensis
Alligator_sinensis_CCG005035.1
I
0.786