bcl6ab (Takifugu rubripes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTRUG00000001788 T112214_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL6B
M02896_2.00 		Homo sapiens
TGCTTTCTAGGAATTMM
KKAATTCCTAGAAAGCA		 SELEX
Jolma et al.(2013)
BCL6B_1 		0.811 0.861
BCL6B
M04499_2.00 		Homo sapiens
NNGCTTTCKAGGAAHN
NDTTCCTMGAAAGCNN		 SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_1 		0.811 0.861
BCL6B
M04500_2.00 		Homo sapiens
NDTTCCTCGATTRCVN
NBGYAATCGAGGAAHN		 SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_2 		0.811 0.861
BCL6B
M04501_2.00 		Homo sapiens
NHGCTTTCTAGGAAHN
NDTTCCTAGAAAGCDN		 SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_1 		0.811 0.861
BCL6B
M04502_2.00 		Homo sapiens
NWTTCCTAGATTACRN
NYGTAATCTAGGAAWN		 SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_2 		0.811 0.861
Bcl6b
M00128_2.00 		Mus musculus
NYYYTYCYWNNN
NNNWRGRARRRN		 PBM
Badis et al.(2009)
Bcl6b_0961 		0.802 0.852
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000004125 C2H2 ZF 496 518
ENSTRUP00000004125 C2H2 ZF 524 546
ENSTRUP00000004125 C2H2 ZF 552 574
ENSTRUP00000004125 C2H2 ZF 580 602
ENSTRUP00000004125 C2H2 ZF 608 631
ENSTRUP00000004126 C2H2 ZF 491 513
ENSTRUP00000004126 C2H2 ZF 519 541
ENSTRUP00000004126 C2H2 ZF 547 569
ENSTRUP00000004126 C2H2 ZF 575 597
ENSTRUP00000004126 C2H2 ZF 603 626

Links

Other C2H2 ZF family TFs
Other Takifugu rubripes TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
bcl6ab Tetraodon nigroviridis ENSTNIG00000007834 I 0.827
bcl6ab Oryzias latipes ENSORLG00000004563 I 0.815
ENSMEUG00000000375 Macropus eugenii ENSMEUG00000000375 I 0.813
BCL6B Monodelphis domestica ENSMODG00000006161 I 0.813
BCL6B Canis familiaris ENSCAFG00000015968 I 0.813
ENSPANG00000024201 Papio anubis ENSPANG00000024201 I 0.811
BCL6B Procavia capensis ENSPCAG00000013548 I 0.811
BCL6B Cavia porcellus ENSCPOG00000004066 I 0.811
ENSAMEG00000016319 Ailuropoda melanoleuca ENSAMEG00000016319 I 0.811
ENSPPYG00000007891 Pongo abelii ENSPPYG00000007891 I 0.811
BCL6B Bos taurus ENSBTAG00000020854 I 0.811
BCL6B Sus scrofa ENSSSCG00000017927 I 0.811
ENSSHAG00000000166 Sarcophilus harrisii ENSSHAG00000000166 I 0.811
BCL6B Tupaia belangeri ENSTBEG00000005792 I 0.811
BCL6B Pan troglodytes ENSPTRG00000008656 I 0.811
ENSP00000293805-D1 Bos grunniens ENSP00000293805-D1 I 0.811
ENSNLEG00000009340 Nomascus leucogenys ENSNLEG00000009340 I 0.811
BCL6B Gorilla gorilla ENSGGOG00000009787 I 0.811
BCL6B Loxodonta africana ENSLAFG00000006642 I 0.811
BCL6B Homo sapiens ENSG00000161940 D 0.811
BCL6B Equus caballus ENSECAG00000023771 I 0.811
Bcl6b Dipodomys ordii ENSDORG00000005538 I 0.811
ENSCSAG00000012171 Chlorocebus sabaeus ENSCSAG00000012171 I 0.811
ENSMLUG00000003564 Myotis lucifugus ENSMLUG00000003564 I 0.811
ENSP00000293805 Macaca fascicularis ENSP00000293805 I 0.811
ENSMPUG00000010670 Mustela putorius furo ENSMPUG00000010670 I 0.811
ENSSTOG00000006365 Ictidomys tridecemlineatus ENSSTOG00000006365 I 0.811
BCL6B Macaca mulatta ENSMMUG00000016268 I 0.811
Myotis_brandtii_BCL6B_10021005 Myotis brandtii Myotis_brandtii_BCL6B_10021005 I 0.811
BCL6B Otolemur garnettii ENSOGAG00000027908 I 0.809
ENSOARG00000009610 Ovis aries ENSOARG00000009610 I 0.809
BCL6B Dasypus novemcinctus ENSDNOG00000035586 I 0.807
BCL6B Ochotona princeps ENSOPRG00000006070 I 0.802
Bcl6b Mus musculus ENSMUSG00000000317 D 0.802
ENSPSIG00000013071 Pelodiscus sinensis ENSPSIG00000013071 I 0.799
Bcl6b Rattus norvegicus ENSRNOG00000059956 I 0.799
BCL6B Tursiops truncatus ENSTTRG00000003982 I 0.796
Alligator_sinensis_CCG005035.1 Alligator sinensis Alligator_sinensis_CCG005035.1 I 0.786