bcl11aa (Takifugu rubripes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTRUG00000003815 T112242_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BCL11A
M07926_2.00
Homo sapiens
BTYTCASTTCCYYHH

DDRRGGAASTGARAV
ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha
0.803 0.947
BCL11A
M08881_2.00
Homo sapiens
BHBYCABTTCCYBHNYN

NRNDVRGGAAVTGRVDV
Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A
0.803 0.947
BCL11A
M10187_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BCL11A_02
0.803 0.947
BCL11B
M04453_2.00
Homo sapiens
GTGAACGBNDNNVCTACAC

GTGTAGBNNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX
0.799 0.921
BCL11B
M04454_2.00
Homo sapiens
GTGAACGBNDNHVCTACAC

GTGTAGBDNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX
0.799 0.921
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000008981 C2H2 ZF 465 487
ENSTRUP00000008981 C2H2 ZF 493 515
ENSTRUP00000008981 C2H2 ZF 820 842
ENSTRUP00000008981 C2H2 ZF 848 870
ENSTRUP00000008981 C2H2 ZF 878 901
ENSTRUP00000008982 C2H2 ZF 458 480
ENSTRUP00000008982 C2H2 ZF 486 508
ENSTRUP00000008982 C2H2 ZF 812 834
ENSTRUP00000008982 C2H2 ZF 840 862
ENSTRUP00000008982 C2H2 ZF 870 893
ENSTRUP00000008983 C2H2 ZF 387 409
ENSTRUP00000008983 C2H2 ZF 415 437
ENSTRUP00000008983 C2H2 ZF 773 795
ENSTRUP00000008983 C2H2 ZF 801 823
ENSTRUP00000008983 C2H2 ZF 831 854
ENSTRUP00000008984 C2H2 ZF 375 397
ENSTRUP00000008984 C2H2 ZF 403 425
ENSTRUP00000008984 C2H2 ZF 761 783
ENSTRUP00000008984 C2H2 ZF 789 811
ENSTRUP00000008984 C2H2 ZF 819 842

Links

Other C2H2 ZF family TFs
Other Takifugu rubripes TFs

Invalid Input OrderBy

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action