ENSTRUG00000003893 (Takifugu rubripes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTRUG00000003893 T112243_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Dbp
M00762_2.00 		Mus musculus
NVTTRYVHVW
WBDBRYAABN		 PBM
Weirauch et al.(2013)
pTH3831 		0.825 0.734
Dbp
M01820_2.00 		Mus musculus
NNWWACRTAANNN
NNNTTAYGTWWNN		 PBM
Weirauch et al.(2014)
pTH4377 		0.825 0.734
DBP
M02827_2.00 		Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN		 SELEX
Jolma et al.(2013)
DBP_1 		0.825 0.734
DBP
M02828_2.00 		Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN		 SELEX
Jolma et al.(2013)
DBP_2 		0.825 0.734
Dbp
M02868_2.00 		Mus musculus
NRTTACGTAAYN
NRTTACGTAAYN		 SELEX
Jolma et al.(2013)
Dbp_1 		0.825 0.734
DBP
M04235_2.00 		Homo sapiens
NVTTACRTAABN
NVTTAYGTAABN		 SELEX
Yin et al.(2017)
DBP_eDBD_HT-SELEX 		0.825 0.734
DBP
M04237_2.00 		Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN		 SELEX
Yin et al.(2017)
DBP_FL_HT-SELEX 		0.825 0.734
DBP
M04013_2.00 		Homo sapiens
RTKACGTAAY
RTTACGTMAY		 SELEX
Rodriguez-Martinez et al.(2017)
DBP.1 		0.825 0.734
DBP
M08785_2.00 		Homo sapiens
VTTRTGYAABN
NVTTRCAYAAB		 Misc
Kulakovskiy et al.(2013)
DBP_HUMAN.H11MO.0.B 		0.825 0.734
Dbp
M08844_2.00 		Mus musculus
VTTRTGYAABN
NVTTRCAYAAB		 Misc
Kulakovskiy et al.(2013)
DBP_MOUSE.H11MO.0.B 		0.825 0.734
DBP
M09934_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DBP_Q6_01 		0.825 0.734
DBP
M09935_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DBP_Q6_02 		0.825 0.734
DBP
M09936_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DBP_Q6 		0.825 0.734
DBP
M04236_2.00 		Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN		 SELEX
Yin et al.(2017)
DBP_eDBD_Methyl-HT-SELEX 		0.825 0.734
DBP
M04238_2.00 		Homo sapiens
NRTTACRTAAYV
BRTTAYGTAAYN		 SELEX
Yin et al.(2017)
DBP_FL_Methyl-HT-SELEX 		0.825 0.734
HLF
M02831_2.00 		Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN		 SELEX
Jolma et al.(2013)
HLF_1 		0.819 0.750
Hlf
M02860_2.00 		Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM		 SELEX
Jolma et al.(2013)
Hlf_1 		0.819 0.750
HLF
M04245_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX 		0.819 0.750
HLF
M04016_2.00 		Homo sapiens
RTKAYRTAAB
VTTAYRTMAY		 SELEX
Rodriguez-Martinez et al.(2017)
HLF.1 		0.819 0.750
HLF
M08786_2.00 		Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN		 Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C 		0.819 0.750
Hlf
M08815_2.00 		Mus musculus
VTTRTGYAABH
DVTTRCAYAAB		 Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C 		0.819 0.750
HLF
M09937_2.00 		Homo sapiens
ATKRYGTAAY
RTTACRYMAT		 Transfac
Matys et al.(2006)
V$HLF_01 		0.819 0.750
HLF
M04246_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX 		0.819 0.750
Tef
M01803_2.00 		Mus musculus
NVTTRYVNNN
NNNBRYAABN		 PBM
Weirauch et al.(2014)
pTH5078 		0.800 0.766
TEF
M02849_2.00 		Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN		 SELEX
Jolma et al.(2013)
TEF_1 		0.800 0.766
TEF
M02850_2.00 		Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN		 SELEX
Jolma et al.(2013)
TEF_2 		0.800 0.766
TEF
M04325_2.00 		Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX 		0.800 0.766
TEF
M09983_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_05 		0.800 0.766
TEF
M09984_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_06 		0.800 0.766
TEF
M09985_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_Q6 		0.800 0.766
TEF
M09986_2.00 		Homo sapiens
MTKAYGTAAY
RTTACRTMAK		 Transfac
Matys et al.(2006)
V$VBP_01 		0.800 0.766
TEF
M04326_2.00 		Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX 		0.800 0.766
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000009173 C2H2 ZF 17 39
ENSTRUP00000009173 C2H2 ZF 48 70
ENSTRUP00000009173 C2H2 ZF 76 98
ENSTRUP00000009173 C2H2 ZF 103 124
ENSTRUP00000009173 C2H2 ZF 125 155
ENSTRUP00000009173 C2H2 ZF 161 183
ENSTRUP00000009173 C2H2 ZF 189 211
ENSTRUP00000009173 C2H2 ZF 217 240
ENSTRUP00000009173 C2H2 ZF 248 271
ENSTRUP00000009174 C2H2 ZF 30 52
ENSTRUP00000009174 C2H2 ZF 61 83
ENSTRUP00000009174 C2H2 ZF 89 111
ENSTRUP00000009174 C2H2 ZF 116 137
ENSTRUP00000009174 C2H2 ZF 146 168
ENSTRUP00000009174 C2H2 ZF 174 196
ENSTRUP00000009174 C2H2 ZF 202 224
ENSTRUP00000009174 C2H2 ZF 230 253
ENSTRUP00000009174 C2H2 ZF 261 284
ENSTRUP00000009174 C2H2 ZF 290 314
ENSTRUP00000009174 C2H2 ZF 462 483
ENSTRUP00000009174 C2H2 ZF 489 511
ENSTRUP00000009174 C2H2 ZF 517 539
ENSTRUP00000009174 C2H2 ZF 545 565
ENSTRUP00000009175 C2H2 ZF 2 24
ENSTRUP00000009175 C2H2 ZF 33 55
ENSTRUP00000009175 C2H2 ZF 61 83
ENSTRUP00000009175 C2H2 ZF 88 109
ENSTRUP00000009175 C2H2 ZF 111 140
ENSTRUP00000009175 C2H2 ZF 146 168
ENSTRUP00000009175 C2H2 ZF 174 196
ENSTRUP00000009175 C2H2 ZF 202 225
ENSTRUP00000009175 C2H2 ZF 233 256
ENSTRUP00000009175 C2H2 ZF 261 283
ENSTRUP00000009175 C2H2 ZF 289 311
ENSTRUP00000009175 C2H2 ZF 317 339
ENSTRUP00000009175 C2H2 ZF 345 368
ENSTRUP00000009176 C2H2 ZF 1 23
ENSTRUP00000009176 C2H2 ZF 32 54
ENSTRUP00000009176 C2H2 ZF 60 82
ENSTRUP00000009176 C2H2 ZF 87 108
ENSTRUP00000009176 C2H2 ZF 117 139
ENSTRUP00000009176 C2H2 ZF 145 167
ENSTRUP00000009176 C2H2 ZF 173 195
ENSTRUP00000009176 C2H2 ZF 201 224
ENSTRUP00000009176 C2H2 ZF 232 255
ENSTRUP00000009176 C2H2 ZF 316 338
ENSTRUP00000009176 C2H2 ZF 344 366
ENSTRUP00000009176 C2H2 ZF 372 394
ENSTRUP00000009176 C2H2 ZF 400 423
ENSTRUP00000009177 C2H2 ZF 1 21
ENSTRUP00000009177 C2H2 ZF 27 49
ENSTRUP00000009177 C2H2 ZF 54 75
ENSTRUP00000009177 C2H2 ZF 77 106
ENSTRUP00000009177 C2H2 ZF 112 134
ENSTRUP00000009177 C2H2 ZF 140 163
ENSTRUP00000009177 C2H2 ZF 246 268
ENSTRUP00000009177 C2H2 ZF 274 296
ENSTRUP00000009177 C2H2 ZF 302 324
ENSTRUP00000009177 C2H2 ZF 330 353
ENSTRUP00000009178 bZIP 180 243
ENSTRUP00000009179 bZIP 192 255
ENSTRUP00000009180 bZIP 179 242
ENSTRUP00000009181 bZIP 160 223
ENSTRUP00000009182 bZIP 158 221

Links

Other C2H2 ZF family TFs
Other Takifugu rubripes TFs

Invalid Input OrderBy

215 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action