gli2b (Takifugu rubripes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTRUG00000007692 T112322_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLI3
M04416_2.00 		Homo sapiens
VGACCACCCACVNHG
CDNBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX 		0.797 0.965
GLI3
M02642_2.00 		Homo sapiens
GACCACCCANK
MNTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI3 		0.797 0.965
GLI3
M08875_2.00 		Homo sapiens
VRACCACCCAV
BTGGGTGGTYB		 Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B 		0.797 0.965
GLI3
M10167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_01 		0.797 0.965
GLI3
M10168_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_Q5_01 		0.797 0.965
GLI3
M04417_2.00 		Homo sapiens
CWHBGTGGGTGGTCY
RGACCACCCACVDWG		 SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX 		0.797 0.965
Gli2
M01024_2.00 		Mus musculus
NGACCACCYN
NRGGTGGTCN		 PBM
Peterson et al.(2012)
Gli2 		0.779 0.922
GLI2
M02875_2.00 		Homo sapiens
GMCCACMCANVNHB
VDNBNTGKGTGGKC		 SELEX
Jolma et al.(2013)
GLI2_1 		0.779 0.922
GLI2
M02876_2.00 		Homo sapiens
GCGACCACVCWR
YWGBGTGGTCGC		 SELEX
Jolma et al.(2013)
GLI2_2 		0.779 0.922
GLI2
M02732_2.00 		Homo sapiens
GACCACMCAN
NTGKGTGGTC		 SELEX
Jolma et al.(2010)
GLI2_monomer 		0.779 0.922
GLI2
M04402_2.00 		Homo sapiens
VGACCACCCACVDHG
CDHBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX 		0.779 0.922
GLI2
M02641_2.00 		Homo sapiens
GACCACCCAHG
CDTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI2 		0.779 0.922
GLI2
M10114_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q3 		0.779 0.922
GLI2
M10115_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q6 		0.779 0.922
GLI2
M04403_2.00 		Homo sapiens
RGACCACCCACVWWG
CWWBGTGGGTGGTCY		 SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX 		0.779 0.922
Gli1
M01023_2.00 		Mus musculus
NGACCACCHN
NDGGTGGTCN		 PBM
Peterson et al.(2012)
Gli1 		0.766 0.861
GLI1
M02643_2.00 		Homo sapiens
GACCACCCAMG
CKTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI1 		0.766 0.861
Gli1
M08976_2.00 		Mus musculus
RGRCCACCCASV
BSTGGGTGGYCY		 Misc
Kulakovskiy et al.(2013)
GLI1_MOUSE.H11MO.0.C 		0.766 0.861
GLI1
M10176_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q2 		0.766 0.861
GLI1
M10177_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3_01 		0.766 0.861
GLI1
M10178_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3 		0.766 0.861
GLI1
M10179_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI_Q6 		0.766 0.861
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000019088 C2H2 ZF 498 523
ENSTRUP00000019088 C2H2 ZF 531 558
ENSTRUP00000019088 C2H2 ZF 564 588
ENSTRUP00000019088 C2H2 ZF 594 619
ENSTRUP00000019088 C2H2 ZF 625 650
ENSTRUP00000019089 C2H2 ZF 453 478
ENSTRUP00000019089 C2H2 ZF 486 513
ENSTRUP00000019089 C2H2 ZF 519 543
ENSTRUP00000019089 C2H2 ZF 549 574
ENSTRUP00000019089 C2H2 ZF 580 605
ENSTRUP00000019090 C2H2 ZF 452 477
ENSTRUP00000019090 C2H2 ZF 485 512
ENSTRUP00000019090 C2H2 ZF 518 542
ENSTRUP00000019090 C2H2 ZF 548 573
ENSTRUP00000019090 C2H2 ZF 579 604
ENSTRUP00000019091 C2H2 ZF 379 404
ENSTRUP00000019091 C2H2 ZF 412 439
ENSTRUP00000019091 C2H2 ZF 445 469
ENSTRUP00000019091 C2H2 ZF 475 500
ENSTRUP00000019091 C2H2 ZF 506 531
ENSTRUP00000019092 C2H2 ZF 375 400
ENSTRUP00000019092 C2H2 ZF 408 435
ENSTRUP00000019092 C2H2 ZF 441 465
ENSTRUP00000019092 C2H2 ZF 471 496
ENSTRUP00000019092 C2H2 ZF 502 527
ENSTRUP00000019093 C2H2 ZF 307 332
ENSTRUP00000019093 C2H2 ZF 340 367
ENSTRUP00000019093 C2H2 ZF 373 397
ENSTRUP00000019093 C2H2 ZF 403 428
ENSTRUP00000019093 C2H2 ZF 434 459
ENSTRUP00000019094 C2H2 ZF 307 332
ENSTRUP00000019094 C2H2 ZF 340 367
ENSTRUP00000019094 C2H2 ZF 373 397
ENSTRUP00000019094 C2H2 ZF 403 428
ENSTRUP00000019094 C2H2 ZF 434 459

Links

Other C2H2 ZF family TFs
Other Takifugu rubripes TFs

Invalid Input OrderBy

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action