znf281b (Takifugu rubripes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTRUG00000008207 T112332_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Zfp281
M00139_2.00
Mus musculus
NHDCCCCCHH

DDGGGGGHDN
PBM
Badis et al.(2009)
Zfp281_0973
0.789 0.879
ZNF281
M04509_2.00
Homo sapiens
SCCCCTCCCCCM

KGGGGGAGGGGS
SELEX
Yin et al.(2017)
ZNF281_eDBD_HT-SELEX
0.789 0.879
ZNF281
M08321_2.00
Homo sapiens
BNCCCCTCCCCC

GGGGGAGGGGNV
ChIP-seq
Schmitges et al.(2016)
Q9Y2X9_1-4.RCADE
0.789 0.879
Zfp281
M08025_2.00
Mus musculus
CCCCWCCCCCMVCHB

VDGBKGGGGGWGGGG
ChIP-seq
Chen et al.(2011)
GSE11329_zfp281
0.789 0.879
ZNF281
M08906_2.00
Homo sapiens
BCCCCTCCCCCHNYN

NRNDGGGGGAGGGGV
Misc
Kulakovskiy et al.(2013)
ZN281_HUMAN.H11MO.0.A
0.789 0.879
Zfp281
M08999_2.00
Mus musculus
CCCCTCCCCCMMCBB

VVGKKGGGGGAGGGG
Misc
Kulakovskiy et al.(2013)
ZN281_MOUSE.H11MO.0.A
0.789 0.879
ZNF281
M10237_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP281_01
0.789 0.879
ZNF281
M04510_2.00
Homo sapiens
RCCCMTCCCCCR

YGGGGGAKGGGY
SELEX
Yin et al.(2017)
ZNF281_eDBD_Methyl-HT-SELEX
0.789 0.879
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000020539 C2H2 ZF 177 199
ENSTRUP00000020539 C2H2 ZF 205 227
ENSTRUP00000020539 C2H2 ZF 233 255
ENSTRUP00000020539 C2H2 ZF 261 282

Links

Other C2H2 ZF family TFs
Other Takifugu rubripes TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BZIP17 Arabidopsis thaliana AT2G40950 D 0.000
TGA1B_TOBAC Nicotiana tabacum TGA1B_TOBAC D 0.000
chr1.CM0269.100.nd Lotus japonicus chr1.CM0269.100.nd I 0.000
gw1.158.68.1 Physcomitrella patens gw1.158.68.1 I 0.000
mgf002378m Mimulus guttatus mgf002378m I 0.000
mgf013640m Mimulus guttatus mgf013640m I 0.000
Aquca_009_00077 Aquilegia coerulea Aquca_009_00077 I 0.000
Bostr.9345s0037 Boechera stricta Bostr.9345s0037 I 0.000
Cagra.1642s0060 Capsella grandiflora Cagra.1642s0060 I 0.000
Carubv10022722m.g Capsella rubella Carubv10022722m.g I 0.000
e_gw1.25.198.1 Physcomitrella patens e_gw1.25.198.1 I 0.000
Cucsa.337510 Cucumis sativus Cucsa.337510 I 0.000
cassava31134.valid.m1 Manihot esculenta cassava31134.valid.m1 I 0.000
cassava24522.valid.m1 Manihot esculenta cassava24522.valid.m1 I 0.000
29940.m000398 Ricinus communis 29940.m000398 I 0.000
Pm016493 Prunus mume Pm016493 I 0.000
Cla017717 Citrullus lanatus Cla017717 I 0.000
Ca_08103 Cicer arietinum Ca_08103 I 0.000
VIT_08s0040g00870 Vitis vinifera VIT_08s0040g00870 I 0.000
Ciclev10011169m.g Citrus clementina Ciclev10011169m.g I 0.000
Eucgr.A02199 Eucalyptus grandis Eucgr.A02199 I 0.000
evm.TU.supercontig_92.68 Carica papaya evm.TU.supercontig_92.68 I 0.000
PK07115.1 Cannabis sativa PK07115.1 I 0.000
Thhalv10016317m.g Eutrema salsugineum Thhalv10016317m.g I 0.000
Thhalv10005827m.g Eutrema salsugineum Thhalv10005827m.g I 0.000
SapurV1A.1072s0100 Salix purpurea SapurV1A.1072s0100 I 0.000
SapurV1A.0159s0210 Salix purpurea SapurV1A.0159s0210 I 0.000
Pavir.J18543 Panicum virgatum Pavir.J18543 I 0.000
Pavir.J00385 Panicum virgatum Pavir.J00385 I 0.000
orange1.1g035544m.g Citrus sinensis orange1.1g035544m.g I 0.000
MDP0000299504 Malus domestica MDP0000299504 I 0.000
MDP0000270677 Malus domestica MDP0000270677 I 0.000
MDP0000180785 Malus domestica MDP0000180785 I 0.000
MDP0000138811 Malus domestica MDP0000138811 I 0.000
Lus10038995.g Linum usitatissimum Lus10038995.g I 0.000
Lus10027290.g Linum usitatissimum Lus10027290.g I 0.000
Lus10012104.g Linum usitatissimum Lus10012104.g I 0.000
Gorai.013G000800 Gossypium raimondii Gorai.013G000800 I 0.000
gene03633-v1.0-hybrid Fragaria vesca gene03633-v1.0-hybrid I 0.000
TRIUR3_02784 Triticum urartu TRIUR3_02784 I 0.000
TRIUR3_00571 Triticum urartu TRIUR3_00571 I 0.000
Traes_2DS_5FA136FBB Triticum aestivum Traes_2DS_5FA136FBB I 0.000
GSMUA_Achr3G24960_001 Musa acuminata GSMUA_Achr3G24960_001 I 0.000
GSMUA_Achr11G25190_001 Musa acuminata GSMUA_Achr11G25190_001 I 0.000
GSMUA_Achr10G01440_001 Musa acuminata GSMUA_Achr10G01440_001 I 0.000
GRMZM2G045236 Zea mays GRMZM2G045236 I 0.000
GLYMA19G30681 Glycine max GLYMA19G30681 I 0.000
GLYMA03G27865 Glycine max GLYMA03G27865 I 0.000
BZIP49 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001722 I 0.000
F775_10026 Aegilops tauschii F775_10026 I 0.000
F775_09858 Aegilops tauschii F775_09858 I 0.000
BRADI2G25400 Brachypodium distachyon BRADI2G25400 I 0.000
Bra034147 Brassica rapa Bra034147 I 0.000
Bra023224 Brassica rapa Bra023224 I 0.000
Bra016959 Brassica rapa Bra016959 I 0.000
Bo4g190610 Brassica oleracea Bo4g190610 I 0.000
Bo4g012880 Brassica oleracea Bo4g012880 I 0.000
BGIOSGA018059 Oryza indica BGIOSGA018059 I 0.000
BZIP49 Arabidopsis thaliana AT3G56660 I 0.000
LPERR05G13000 Leersia perrieri LPERR05G13000 I 0.000
MLOC_42759 Hordeum vulgare MLOC_42759 I 0.000
MLOC_58500 Hordeum vulgare MLOC_58500 I 0.000
TCM_023889 Theobroma cacao TCM_023889 I 0.000
Solyc10g078290.1 Solanum lycopersicum Solyc10g078290.1 I 0.000
Si021442m.g Setaria italica Si021442m.g I 0.000
BZIP17 Arabidopsis lyrata scaffold_402899.1 I 0.000
Sb09g020320 Sorghum bicolor Sb09g020320 I 0.000
PRUPE_ppa002181mg Prunus persica PRUPE_ppa002181mg I 0.000
POPTR_0016s03220 Populus trichocarpa POPTR_0016s03220 I 0.000
POPTR_0006s03300 Populus trichocarpa POPTR_0006s03300 I 0.000
PGSC0003DMG400007175 Solanum tuberosum PGSC0003DMG400007175 I 0.000
BZIP39 Oryza sativa OS05G0411300 I 0.000
ORUFI05G17550 Oryza rufipogon ORUFI05G17550 I 0.000
ORGLA05G0141100 Oryza glaberrima ORGLA05G0141100 I 0.000
OPUNC05G14460 Oryza punctata OPUNC05G14460 I 0.000
ONIVA05G17010 Oryza nivara ONIVA05G17010 I 0.000
OGLUM05G17320 Oryza glumaepatula OGLUM05G17320 I 0.000
OB05G24300 Oryza brachyantha OB05G24300 I 0.000
MTR_7g088890 Medicago truncatula MTR_7g088890 I 0.000
AMTR_s00101p00121930 Amborella trichopoda AMTR_s00101p00121930 I 0.000