znf143 (Takifugu rubripes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTRUG00000009324 T112345_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF143
M02899_2.00
Homo sapiens
YWCCCAYAATGCAYYG

CRRTGCATTRTGGGWR
SELEX
Jolma et al.(2013)
ZNF143_1
0.814 0.919
ZNF143
M07931_2.00
Homo sapiens
RACTACAWYTCCCAG

CTGGGARWTGTAGTY
ChIP-seq
Gerstein et al.(2012)
GM12878_ZNF143_Stanford
0.814 0.919
ZNF143
M08910_2.00
Homo sapiens
RRACTACAWYTCCCAGVRKSCH

DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_HUMAN.H11MO.0.A
0.814 0.919
ZNF143
M09510_2.00
Homo sapiens
NNYTCCCAKVAKSCH

DGSMTBMTGGGARNN
Misc
Heinz et al.(2010)
CUTLL-ZNF143_GSE29600
0.814 0.919
ZNF143
M10247_2.00
Homo sapiens
NYYWCCCABMATGCAHYRCRNB

VNYGYRDTGCATKVTGGGWRRN
Transfac
Matys et al.(2006)
V$STAF_01
0.814 0.919
ZNF143
M10248_2.00
Homo sapiens
MHBWCCCAKVRTBCMWHGMRV

BYKCDWKGVAYBMTGGGWVDK
Transfac
Matys et al.(2006)
V$STAF_02
0.814 0.919
ZNF143
M10249_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAF_Q4_01
0.814 0.919
Zfp143
M09010_2.00
Mus musculus
RRACTACAWYTCCCAGVRKSCH

DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_MOUSE.H11MO.0.A
0.813 0.919
ZNF76
M04398_2.00
Homo sapiens
NNHWCCCABAATGCAHYRCRN

NYGYRDTGCATTVTGGGWDNN
SELEX
Yin et al.(2017)
ZNF76_eDBD_HT-SELEX
0.766 0.826
ZNF76
M08278_2.00
Homo sapiens
BCSCRNDGSMTBCTGGGARNT

ANYTCCCAGVAKSCHNYGSGV
ChIP-seq
Schmitges et al.(2016)
P36508_1-7.RCADE
0.766 0.826
ZNF76
M08856_2.00
Homo sapiens
ACTMCMHYTCCCAGVRKSCHHY

RDDGSMYBCTGGGARDKGKAGT
Misc
Kulakovskiy et al.(2013)
ZNF76_HUMAN.H11MO.0.C
0.766 0.826
ZNF76
M04399_2.00
Homo sapiens
NYTWCCCAYAATGCAHYRCDN

NHGYRDTGCATTRTGGGWARN
SELEX
Yin et al.(2017)
ZNF76_eDBD_Methyl-HT-SELEX
0.766 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000023450 C2H2 ZF 264 288
ENSTRUP00000023450 C2H2 ZF 294 318
ENSTRUP00000023450 C2H2 ZF 324 348
ENSTRUP00000023450 C2H2 ZF 354 378
ENSTRUP00000023450 C2H2 ZF 384 408
ENSTRUP00000023450 C2H2 ZF 414 438
ENSTRUP00000023450 C2H2 ZF 444 467
ENSTRUP00000023451 C2H2 ZF 224 248
ENSTRUP00000023451 C2H2 ZF 254 278
ENSTRUP00000023451 C2H2 ZF 284 308
ENSTRUP00000023451 C2H2 ZF 314 338
ENSTRUP00000023451 C2H2 ZF 344 368
ENSTRUP00000023451 C2H2 ZF 374 398
ENSTRUP00000023451 C2H2 ZF 404 427
ENSTRUP00000023452 C2H2 ZF 250 274
ENSTRUP00000023452 C2H2 ZF 280 304
ENSTRUP00000023452 C2H2 ZF 310 334
ENSTRUP00000023452 C2H2 ZF 340 364
ENSTRUP00000023452 C2H2 ZF 370 394
ENSTRUP00000023452 C2H2 ZF 400 424
ENSTRUP00000023452 C2H2 ZF 430 453
ENSTRUP00000023453 C2H2 ZF 197 221
ENSTRUP00000023453 C2H2 ZF 227 251
ENSTRUP00000023453 C2H2 ZF 257 281
ENSTRUP00000023453 C2H2 ZF 287 311
ENSTRUP00000023453 C2H2 ZF 317 341
ENSTRUP00000023453 C2H2 ZF 347 371
ENSTRUP00000023453 C2H2 ZF 377 400

Links

Other C2H2 ZF family TFs
Other Takifugu rubripes TFs

Invalid Input OrderBy

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action