hic1l (Takifugu rubripes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTRUG00000013139 T112408_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HIC2
M02902_2.00
Homo sapiens
RTGCCMVNN

NNBKGGCAY
SELEX
Jolma et al.(2013)
HIC2_1
0.819 0.948
Hic1
M00141_2.00
Mus musculus
RTGCCMNBN

NVNKGGCAY
PBM
Badis et al.(2009)
Hic1_2816
0.789 0.852
Hic1
M02933_2.00
Mus musculus
RTGCCAVCYBRTGCCAVC

GBTGGCAYVRGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_1
0.789 0.852
Hic1
M02934_2.00
Mus musculus
RTGCCAVCN

NGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_2
0.789 0.852
Hic1
M09003_2.00
Mus musculus
KGGCAMCCH

DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C
0.789 0.852
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000033426 C2H2 ZF 310 332
ENSTRUP00000033426 C2H2 ZF 368 390
ENSTRUP00000033426 C2H2 ZF 396 418
ENSTRUP00000033426 C2H2 ZF 424 446
ENSTRUP00000033426 C2H2 ZF 452 474
ENSTRUP00000033427 C2H2 ZF 420 442
ENSTRUP00000033427 C2H2 ZF 484 506
ENSTRUP00000033427 C2H2 ZF 512 534
ENSTRUP00000033427 C2H2 ZF 540 562
ENSTRUP00000033427 C2H2 ZF 568 590
ENSTRUP00000033428 C2H2 ZF 417 439
ENSTRUP00000033428 C2H2 ZF 481 503
ENSTRUP00000033428 C2H2 ZF 509 531
ENSTRUP00000033428 C2H2 ZF 537 559
ENSTRUP00000033428 C2H2 ZF 565 587

Links

Other C2H2 ZF family TFs
Other Takifugu rubripes TFs

Invalid Input OrderBy

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action