bcl11ab (Takifugu rubripes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTRUG00000013751 T112417_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BCL11A
M07926_2.00
Homo sapiens
BTYTCASTTCCYYHH

DDRRGGAASTGARAV
ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha
0.815 0.939
BCL11A
M08881_2.00
Homo sapiens
BHBYCABTTCCYBHNYN

NRNDVRGGAAVTGRVDV
Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A
0.815 0.939
BCL11A
M10187_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BCL11A_02
0.815 0.939
BCL11B
M04453_2.00
Homo sapiens
GTGAACGBNDNNVCTACAC

GTGTAGBNNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX
0.811 0.921
BCL11B
M04454_2.00
Homo sapiens
GTGAACGBNDNHVCTACAC

GTGTAGBDNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX
0.811 0.921
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000035120 C2H2 ZF 467 488
ENSTRUP00000035120 C2H2 ZF 494 516
ENSTRUP00000035120 C2H2 ZF 807 829
ENSTRUP00000035120 C2H2 ZF 835 857
ENSTRUP00000035120 C2H2 ZF 865 888
ENSTRUP00000035121 C2H2 ZF 409 430
ENSTRUP00000035121 C2H2 ZF 436 458
ENSTRUP00000035121 C2H2 ZF 749 771
ENSTRUP00000035121 C2H2 ZF 777 799
ENSTRUP00000035121 C2H2 ZF 807 830
ENSTRUP00000035122 C2H2 ZF 375 396
ENSTRUP00000035122 C2H2 ZF 402 424
ENSTRUP00000035122 C2H2 ZF 715 737
ENSTRUP00000035122 C2H2 ZF 743 765
ENSTRUP00000035122 C2H2 ZF 773 796
ENSTRUP00000035123 C2H2 ZF 375 396
ENSTRUP00000035123 C2H2 ZF 402 424
ENSTRUP00000035123 C2H2 ZF 699 721
ENSTRUP00000035123 C2H2 ZF 727 749
ENSTRUP00000035123 C2H2 ZF 757 780

Links

Other C2H2 ZF family TFs
Other Takifugu rubripes TFs

Invalid Input OrderBy

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action