im:7142702 (Takifugu rubripes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTRUG00000018074 T112487_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BCL11B
M04453_2.00
Homo sapiens
GTGAACGBNDNNVCTACAC

GTGTAGBNNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX
0.821 0.947
BCL11B
M04454_2.00
Homo sapiens
GTGAACGBNDNHVCTACAC

GTGTAGBDNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX
0.821 0.947
BCL11A
M07926_2.00
Homo sapiens
BTYTCASTTCCYYHH

DDRRGGAASTGARAV
ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha
0.801 0.912
BCL11A
M08881_2.00
Homo sapiens
BHBYCABTTCCYBHNYN

NRNDVRGGAAVTGRVDV
Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A
0.801 0.912
BCL11A
M10187_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BCL11A_02
0.801 0.912
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000046279 C2H2 ZF 347 368
ENSTRUP00000046279 C2H2 ZF 374 396
ENSTRUP00000046279 C2H2 ZF 704 726
ENSTRUP00000046279 C2H2 ZF 732 754
ENSTRUP00000046279 C2H2 ZF 762 785
ENSTRUP00000046280 C2H2 ZF 348 369
ENSTRUP00000046280 C2H2 ZF 375 397
ENSTRUP00000046281 C2H2 ZF 417 438
ENSTRUP00000046281 C2H2 ZF 444 466
ENSTRUP00000046281 C2H2 ZF 774 796
ENSTRUP00000046281 C2H2 ZF 802 824
ENSTRUP00000046281 C2H2 ZF 832 855
ENSTRUP00000046282 C2H2 ZF 414 435
ENSTRUP00000046282 C2H2 ZF 441 463
ENSTRUP00000046282 C2H2 ZF 747 769
ENSTRUP00000046282 C2H2 ZF 775 797
ENSTRUP00000046282 C2H2 ZF 805 828
ENSTRUP00000046283 C2H2 ZF 378 399
ENSTRUP00000046283 C2H2 ZF 405 427
ENSTRUP00000046283 C2H2 ZF 735 757
ENSTRUP00000046283 C2H2 ZF 763 785
ENSTRUP00000046283 C2H2 ZF 793 816

Links

Other C2H2 ZF family TFs
Other Takifugu rubripes TFs

Invalid Input OrderBy

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action