ZNF550 (Tursiops truncatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTTRG00000000293 T112928_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF550
M07772_2.00 		Homo sapiens
TGCCYTAGCMBWSRYTYY
RRARYSWVKGCTARGGCA		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF550.RCADE.OriginalMapping 		0.800 0.924
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000000275 C2H2 ZF 184 206
ENSTTRP00000000275 C2H2 ZF 212 234
ENSTTRP00000000275 C2H2 ZF 240 262
ENSTTRP00000000275 C2H2 ZF 268 290
ENSTTRP00000000275 C2H2 ZF 296 318
ENSTTRP00000000275 C2H2 ZF 324 346
ENSTTRP00000000275 C2H2 ZF 352 374
ENSTTRP00000000275 C2H2 ZF 380 402

Links

Other C2H2 ZF family TFs
Other Tursiops truncatus TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000004910 Ailuropoda melanoleuca ENSAMEG00000004910 I 0.802
ZNF550 Canis familiaris ENSCAFG00000002421 I 0.802
ENSTSYG00000004591 Tarsius syrichta ENSTSYG00000004591 I 0.801
ENSNLEG00000010977 Nomascus leucogenys ENSNLEG00000010977 I 0.800
ENSMMUP00000031401 Macaca fascicularis ENSMMUP00000031401 I 0.800
ZNF550 Pan troglodytes ENSPTRG00000011560 I 0.800
ZNF550 Macaca mulatta ENSMMUG00000006122 I 0.800
ENSCSAG00000001629 Chlorocebus sabaeus ENSCSAG00000001629 I 0.800
ZNF550 Gorilla gorilla ENSGGOG00000014068 I 0.800
ZNF550 Homo sapiens ENSG00000251369 D 0.800
ENSMPUG00000006298 Mustela putorius furo ENSMPUG00000006298 I 0.797
ZNF550 Callithrix jacchus ENSCJAG00000000044 I 0.797
ENSOARG00000003673 Ovis aries ENSOARG00000003673 I 0.789