ZSCAN16 (Tursiops truncatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTTRG00000013470 T113294_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZSCAN16
M02924_2.00 		Homo sapiens
MRTGTTAACAGAACACCY
RGGTGTTCTGTTAACAYK		 SELEX
Jolma et al.(2013)
ZNF435_1 		0.809 0.978
ZSCAN16
M04623_2.00 		Homo sapiens
HGAGGCTCTGTTAACAHTB
VADTGTTAACAGAGCCTCD		 SELEX
Yin et al.(2017)
ZSCAN16_eDBD_HT-SELEX 		0.809 0.978
ZSCAN16
M04625_2.00 		Homo sapiens
NGAGGCTCTGTTAACANYN
NRNTGTTAACAGAGCCTCN		 SELEX
Yin et al.(2017)
ZSCAN16_FL_HT-SELEX 		0.809 0.978
ZSCAN16
M08377_2.00 		Homo sapiens
RTRTRTRTATRTRTRTRTATATRT
AYATATAYAYAYAYATAYAYAYAY		 ChIP-seq
Schmitges et al.(2016)
Q9H4T2.MEME 		0.809 0.978
ZSCAN16
M04624_2.00 		Homo sapiens
HGAGGCTCTGTTAACAHTB
VADTGTTAACAGAGCCTCD		 SELEX
Yin et al.(2017)
ZSCAN16_eDBD_Methyl-HT-SELEX 		0.809 0.978
ZSCAN16
M04626_2.00 		Homo sapiens
NGAGGCTCTGTTAACAHTN
NADTGTTAACAGAGCCTCN		 SELEX
Yin et al.(2017)
ZSCAN16_FL_Methyl-HT-SELEX 		0.809 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000012777 C2H2 ZF 232 254
ENSTTRP00000012777 C2H2 ZF 260 282
ENSTTRP00000012777 C2H2 ZF 288 310
ENSTTRP00000012777 C2H2 ZF 316 338

Links

Other C2H2 ZF family TFs
Other Tursiops truncatus TFs

Invalid Input OrderBy

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action