ZNF449 (Vicugna pacos)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSVPAG00000002342 T113469_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF449
M04560_2.00
Homo sapiens
NTGYTKGCWCGCGAB

VTCGCGWGCMARCAN
SELEX
Yin et al.(2017)
ZNF449_eDBD_HT-SELEX_1
0.823 0.975
ZNF449
M04561_2.00
Homo sapiens
RCGCCCAACC

GGTTGGGCGY
SELEX
Yin et al.(2017)
ZNF449_eDBD_HT-SELEX_2
0.823 0.975
ZNF449
M08344_2.00
Homo sapiens
NNVAGCCCARCCHNNNNNNNN

NNNNNNNNDGGYTGGGCTBNN
ChIP-seq
Schmitges et al.(2016)
Q6P9G9_1-7.RCADE
0.823 0.975
ZNF449
M08922_2.00
Homo sapiens
VAGCCCARCCN

NGGYTGGGCTB
Misc
Kulakovskiy et al.(2013)
ZN449_HUMAN.H11MO.0.C
0.823 0.975
ZNF449
M04562_2.00
Homo sapiens
MMGCCCMACC

GGTKGGGCKK
SELEX
Yin et al.(2017)
ZNF449_eDBD_Methyl-HT-SELEX_1
0.823 0.975
ZNF449
M04563_2.00
Homo sapiens
NTGYTKGCDCGCGWB

VWCGCGHGCMARCAN
SELEX
Yin et al.(2017)
ZNF449_eDBD_Methyl-HT-SELEX_2
0.823 0.975
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSVPAP00000002165 C2H2 ZF 323 345
ENSVPAP00000002165 C2H2 ZF 351 373
ENSVPAP00000002165 C2H2 ZF 379 401
ENSVPAP00000002165 C2H2 ZF 407 429
ENSVPAP00000002165 C2H2 ZF 435 457
ENSVPAP00000002165 C2H2 ZF 463 485
ENSVPAP00000002165 C2H2 ZF 491 513

Links

Other C2H2 ZF family TFs
Other Vicugna pacos TFs

Invalid Input OrderBy

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action