CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSVPAG00000006670
(
Vicugna pacos
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSVPAG00000006670
T113566_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF350
M08396_2.00
Homo sapiens
NDGYYYTTTTWTDMYBHVNHN
NDNBDVRKHAWAAAARRRCHN
ChIP-seq
Schmitges et al.(2016)
Q9GZX5_2-8.RCADE
0.799
0.924
ZNF350
M08960_2.00
Homo sapiens
VDBBYYTTTTHWDHCYHN
NDRGDHWDAAAARRVVHB
Misc
Kulakovskiy et al.(2013)
ZN350_HUMAN.H11MO.0.C
0.799
0.924
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSVPAP00000006194
C2H2 ZF
198
220
HVCGECGKAFIKKSWLTDHQIIH
ENSVPAP00000006194
C2H2 ZF
226
248
HRCNLCGKAFSRKFMLTEHQRTH
ENSVPAP00000006194
C2H2 ZF
254
276
YECTECGKAFLKKSRLNIHQKTH
ENSVPAP00000006194
C2H2 ZF
282
304
YVCSDCGKGFIQKGNLIVHQRIH
ENSVPAP00000006194
C2H2 ZF
310
332
YICTECGKGFIQKTCLIAHQRFH
ENSVPAP00000006194
C2H2 ZF
338
360
FVCSQCGKSCSQKSGLIKHQRIH
ENSVPAP00000006194
C2H2 ZF
366
388
FECSDCGKAFTTKQKLIVHQRTH
ENSVPAP00000006194
C2H2 ZF
394
416
YICSECGKAFAYMSCLVKHKRIH
Links
Other
C2H2 ZF
family TFs
Other
Vicugna pacos
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy