ZNF558 (Vicugna pacos)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSVPAG00000010290 T113640_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF558
M07620_2.00
Homo sapiens
HKGRAYHTGTRGRTKBATRYCTTYCAK

MTGRAAGRYATVMAYCYACADRTYCMD
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF558.RCADE.ReprocessedData
0.818 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSVPAP00000009572 C2H2 ZF 153 174
ENSVPAP00000009572 C2H2 ZF 180 202
ENSVPAP00000009572 C2H2 ZF 208 230
ENSVPAP00000009572 C2H2 ZF 236 258
ENSVPAP00000009572 C2H2 ZF 264 286
ENSVPAP00000009572 C2H2 ZF 292 314
ENSVPAP00000009572 C2H2 ZF 320 342
ENSVPAP00000009572 C2H2 ZF 348 370
ENSVPAP00000009572 C2H2 ZF 376 398

Links

Other C2H2 ZF family TFs
Other Vicugna pacos TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSP00000404065-D15 Bos grunniens ENSP00000404065-D15 I 0.825
ZNF558 Sus scrofa ENSSSCG00000029035 I 0.825
ZNF558 Bos taurus ENSBTAG00000030929 I 0.825
ENSAMEG00000008173 Ailuropoda melanoleuca ENSAMEG00000008173 I 0.824
ZNF558 Equus caballus ENSECAG00000012836 I 0.824
ENSMPUG00000008460 Mustela putorius furo ENSMPUG00000008460 I 0.823
ZNF558 Canis familiaris ENSCAFG00000030395 I 0.823
ENSPPYG00000009513 Pongo abelii ENSPPYG00000009513 I 0.819
ENSPANG00000011044 Papio anubis ENSPANG00000011044 I 0.819
ENSSTOG00000002432 Ictidomys tridecemlineatus ENSSTOG00000002432 I 0.819
ZNF558 Tursiops truncatus ENSTTRG00000014447 I 0.819
ENSP00000410703 Macaca fascicularis ENSP00000410703 I 0.819
ENSCSAG00000007844 Chlorocebus sabaeus ENSCSAG00000007844 I 0.819
ZNF558 Otolemur garnettii ENSOGAG00000008204 I 0.819
ZNF557 Macaca mulatta ENSMMUG00000019966 I 0.819
ENSNLEG00000011956 Nomascus leucogenys ENSNLEG00000011956 I 0.819
ZNF558 Callithrix jacchus ENSCJAG00000011049 I 0.818
ZNF558 Pan troglodytes ENSPTRG00000010432 I 0.818
ZNF558 Homo sapiens ENSG00000167785 D 0.818
ZNF558 Gorilla gorilla ENSGGOG00000006642 I 0.818
ZNF558 Cavia porcellus ENSCPOG00000009453 I 0.817
ZNF558 Pteropus vampyrus ENSPVAG00000001544 I 0.816
Zfp558 Mus musculus ENSMUSG00000074500 I 0.785
ENSTSYG00000001297 Tarsius syrichta ENSTSYG00000001297 I 0.760